Added hook to structured_data (row_reader_hook) for integration testi…

…ng purposes.

CHANGELOG.rst

@@ -10,6 +10,7 @@ Change Log
 ======
 * Changes related to pyinstaller experimentation for smaht-submitr.
   Mostly changing calls to exit to sys.exit; and related license_utils change.
+* Added hook to structured_data (row_reader_hook) for integration testing purposes.
 
 
 8.10.0

dcicutils/structured_data.py

@@ -57,6 +57,7 @@ def __init__(self, file: Optional[str] = None, portal: Optional[Union[VirtualApp
                  ref_lookup_nocache: bool = False,
                  norefs: bool = False, merge: bool = False,
                  progress: Optional[Callable] = None,
+                 row_reader_hook: Optional[Callable] = None,
                  debug_sleep: Optional[str] = None) -> None:
         self._progress = progress if callable(progress) else None
         self._data = {}
@@ -75,6 +76,7 @@ def __init__(self, file: Optional[str] = None, portal: Optional[Union[VirtualApp
         self._autoadd_properties = autoadd if isinstance(autoadd, dict) and autoadd else None
         self._norefs = True if norefs is True else False
         self._merge = True if merge is True else False  # New merge functionality (2024-05-25)
+        self._row_reader_hook = row_reader_hook if callable(row_reader_hook) else None  # Testing support (2024-06-12)
         self._debug_sleep = None
         if debug_sleep:
             try:
@@ -377,6 +379,8 @@ def _load_reader(self, reader: RowReader, type_name: str) -> None:
                 structured_row_template = _StructuredRowTemplate(reader.header, schema)
             structured_row = structured_row_template.create_row()
             for column_name, value in row.items():
+                if self._row_reader_hook:
+                    value = self._row_reader_hook(reader.sheet_name, column_name, value)
                 structured_row_template.set_value(structured_row, column_name, value, reader.file, reader.row_number)
                 if self._autoadd_properties:
                     self._add_properties(structured_row, self._autoadd_properties, schema)

pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "dcicutils"
-version = "8.10.0.1b2"  # TODO: To become 8.10.1
+version = "8.10.0.1b3"  # TODO: To become 8.10.1
 description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
 authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
 license = "MIT"