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setup.py
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import codecs
import os.path
from setuptools import setup
def read(rel_path):
here = os.path.abspath(os.path.dirname(__file__))
with codecs.open(os.path.join(here, rel_path), 'r') as fp:
return fp.read()
def get_version(rel_path):
for line in read(rel_path).splitlines():
if line.startswith('__version__'):
delim = '"' if '"' in line else "'"
return line.split(delim)[1]
else:
raise RuntimeError("Unable to find version string.")
setup(
name='Utmos',
version=get_version('utmos/__init__.py'),
author="ACEnglish",
author_email="acenglish@gmail.com",
url="https://github.com/acenglish/utmos",
packages=['utmos'],
license='MIT',
description="Maximum-coverage algorithm for genomic variants",
long_description=open('README.md', encoding='UTF-8').read(),
long_description_content_type='text/markdown',
entry_points={
'console_scripts': [
'utmos = utmos.__main__:main'
]
},
install_requires=[
"truvari>=3.5.0",
"scikit-allel==1.3.5",
"h5py==3.7.0",
],
)