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AMICI v0.11.28

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@dweindl dweindl released this 08 Apr 22:14
· 591 commits to master since this release
da34367

New features:

  • Added Solver.setSteadyStateToleranceFactor and Solver.setSteadyStateSensiToleranceFactor to specify a steady state tolerance factor by @dilpath in #1758
    NOTE: This also relaxes the default steady state (sensitivity) tolerances by a factor of 100.
  • Added support for pathlib.Path by @dweindl in #1769
  • Allow specifying initial timepoint with ExpData by @dilpath in #1776

Performance:

Fixes:

  • Fixed deprecation warning for pandas.DataFrame.append in rdatas_to_measurement_df by @dweindl in #1770
  • Fixed Rule-target handling in PEtab import by @dweindl in #1753

Removed functionality:

  • Removed long deprecated sbml2amici arguments modelName and constantParameters by @dweindl in #1774