AMICI v0.15.0
Features
-
Improved logging by @dweindl in #1907
For Python: Don't print messages to stdout, but collect them in ReturnData
and forward them to python logging, making it easier to filter specific
messages or to disable output completely. Messages are also available via
ReturnData.messages
.breaking change for C++ interface:
Messages aren't printed to stdout by default, but are collected in
ReturnData
. The user has to decide what to do with them. -
MultiArch docker build by @FFroehlich in #1903
-
Updated clang-format style, fixed clang-format target by @dweindl in #1908
-
Subsetting
ReturnData
fields by ID viaReturnDataView.by_id
by @dweindl in #1911 #1916
Fixes
- PEtab import: fixed handling of fixed parameters for rule targets by @dweindl in #1915
- Fixed compiler warnings for matlab interface by @dweindl in #1919
- Fixed pandas DeprecationWarning for Series.iteritems() by @dweindl in #1921
- Fixed circular import in amici.petab_import_pysb by @dweindl in #1922
- Fixed 'operator ==' swig warning by @dweindl in #1923
- Prevent swig4.0.1 segfault by @dweindl in #1924
Full Changelog: v0.14.0...v0.15.0