AMICI v0.16.0
Features
- Python 3.11 compatibility by @dweindl in #1876
- AMICI now runs on binder (example) by @dweindl in #1935, #1937, #1939
- More informative
Solver.__repr__
andExpData.__repr__
by @dweindl in #1928 and @FFroehlich in #1948 simulate_petab
returns the generated/usedExpData
s by @dweindl in #1933- Model module is now accessible from model instance by @dweindl in #1932
- Added
plot_jacobian
by @dweindl in #1930 - Now logs all nested execution times as debug by @FFroehlich in #1947
- Always check for finite initial states, not only with
Model.setAlwaysCheckFinite(True)
by @dweindl in #1955
Fixes
ReturnDataView.status
now returnsint
instead offloat
by @dweindl in #1929- Updated simulation status codes by @dweindl in #1931
- Skip irrelevant frames in stacktraces by @dweindl in #1934
- Fixed compiler warning (matlab) by @dweindl in #1954
Documentation:
- Added a notebook demonstrating common simulation failures and show how to analyze / fix them by @dweindl in #1946
- various minor fixes / updates
Full Changelog: v0.15.0...v0.16.0