From c9eca5e63b941b744d85f7e0e8604e1218253359 Mon Sep 17 00:00:00 2001
From: Carlos Sevilla Salcedo <carlossevillasalcedo@gmail.com>
Date: Fri, 22 Sep 2023 12:59:32 +0200
Subject: [PATCH] Update example XML files

---
 .../xml_files/KNN-classification_demo.xml     |  68 +++++++---
 src/vai_lab/examples/xml_files/SVR_demo.xml   |  71 ++++++----
 .../examples/xml_files/canvas_demo.xml        |  55 ++++----
 .../xml_files/k-mean_clustering_demo.xml      |  81 ++++++++----
 .../xml_files/pybullet_env_example.xml        |  54 ++++----
 .../xml_files/random_forest_class_demo.xml    | 116 ++++++++++++-----
 .../examples/xml_files/regression_demo.xml    |  44 -------
 .../xml_files/ridge-scalar-ridge_demo.xml     | 123 +++++++++++++-----
 .../xml_files/ridge_regression_demo.xml       |  49 -------
 .../examples/xml_files/scalar_demo.xml        |  52 --------
 .../examples/xml_files/scaler-lasso_demo.xml  |  67 ----------
 ...dback_demo2.xml => user_feedback_demo.xml} |  25 ++--
 12 files changed, 403 insertions(+), 402 deletions(-)
 delete mode 100644 src/vai_lab/examples/xml_files/regression_demo.xml
 delete mode 100644 src/vai_lab/examples/xml_files/ridge_regression_demo.xml
 delete mode 100644 src/vai_lab/examples/xml_files/scalar_demo.xml
 delete mode 100644 src/vai_lab/examples/xml_files/scaler-lasso_demo.xml
 rename src/vai_lab/examples/xml_files/{user_feedback_demo2.xml => user_feedback_demo.xml} (74%)

diff --git a/src/vai_lab/examples/xml_files/KNN-classification_demo.xml b/src/vai_lab/examples/xml_files/KNN-classification_demo.xml
index e6bc3fb5..d017339f 100644
--- a/src/vai_lab/examples/xml_files/KNN-classification_demo.xml
+++ b/src/vai_lab/examples/xml_files/KNN-classification_demo.xml
@@ -4,42 +4,76 @@
             <child name="Modelling" />
         </relationships>
         <coordinates>
-            [(350.0,50),0,{}]
+            [(350.0, 50), 0, {}]
         </coordinates>
         <inputdata>
-            <X file="./examples/supervised_classification/X_tr.csv" />
-            <Y file="./examples/supervised_classification/Y_tr.csv" />
-            <X_test file="./examples/supervised_classification/X_tst.csv" />
-            <Y_test file="./examples/supervised_classification/Y_tst.csv" />
+            <X file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_classification/X_tr.csv" />
+            <Y file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_classification/Y_tr.csv" />
+            <X_test file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_classification/X_tst.csv" />
+            <Y_test file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_classification/Y_tst.csv" />
         </inputdata>
     </Initialiser>
     <Modelling name="Modelling">
+        <inputdata>
+            <X module="Initialiser" />
+        </inputdata>
         <relationships>
             <parent name="Initialiser" />
             <child name="Output" />
         </relationships>
         <coordinates>
-            [(350.0,350.0),2,{0:'d0-u2'}]
+            [(350.0, 350.0), 2, {0: 'd0-u2'}]
         </coordinates>
-        <inputdata>
-            <X module="Initialiser" />
-        </inputdata>
-        <plugin type="KNNClassifier" />
+        <plugin type="KNNClassifier">
+            <options>
+                <weights>
+                     distance
+                </weights>
+                <n_neighbors>
+                     7
+                </n_neighbors>
+            </options>
+            <method type="fit">
+                <options>
+                    <X>
+                         X
+                    </X>
+                    <y>
+                         Y
+                    </y>
+                </options>
+            </method>
+            <method type="score">
+                <options>
+                    <X>
+                         X
+                    </X>
+                    <y>
+                         Y
+                    </y>
+                </options>
+            </method>
+        </plugin>
     </Modelling>
     <Output name="Output">
+        <inputdata>
+            <X module="Modelling" />
+        </inputdata>
         <relationships>
             <parent name="Modelling" />
         </relationships>
         <coordinates>
-            [(350.0,650),1,{2:'d2-u1'}]
+            [(350.0, 650), 1, {2: 'd2-u1'}]
         </coordinates>
         <plugin type="Output">
-            <outdata>
-                Modelling
-            </outdata>
-            <outpath>
-                 .\examples\results\output.pkl
-            </outpath>
+            <options>
+                <outdata>
+                    Modelling
+                </outdata>
+                <outpath>
+                     .\examples\results\output.pkl
+                </outpath>
+            </options>
         </plugin>
     </Output>
 </pipeline>
diff --git a/src/vai_lab/examples/xml_files/SVR_demo.xml b/src/vai_lab/examples/xml_files/SVR_demo.xml
index f94fa31e..5d38db16 100644
--- a/src/vai_lab/examples/xml_files/SVR_demo.xml
+++ b/src/vai_lab/examples/xml_files/SVR_demo.xml
@@ -4,49 +4,76 @@
             <child name="Modelling" />
         </relationships>
         <coordinates>
-            [(350.0,50),0,{}]
+            [(350.0, 50), 0, {}]
         </coordinates>
         <inputdata>
-            <X file="./examples/supervised_regression/X_tr.csv" />
-            <Y file="./examples/supervised_regression/Y_tr.csv" />
-            <X_test file="./examples/supervised_regression/X_tst.csv" />
-            <Y_test file="./examples/supervised_regression/Y_tst.csv" />
+            <X file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_regression/X_tr.csv" />
+            <Y file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_regression/Y_tr.csv" />
+            <X_test file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_regression/X_tst.csv" />
+            <Y_test file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_regression/Y_tst.csv" />
         </inputdata>
     </Initialiser>
     <Modelling name="Modelling">
+        <inputdata>
+            <X module="Initialiser" />
+        </inputdata>
         <relationships>
             <parent name="Initialiser" />
             <child name="Output" />
         </relationships>
         <coordinates>
-            [(350.0,350.0),2,{0:'d0-u2'}]
+            [(350.0, 350.0), 2, {0: 'd0-u2'}]
         </coordinates>
-        <inputdata>
-            <X module="Initialiser" />
-        </inputdata>
         <plugin type="SVR">
-            <C>
-                 0.1
-            </C>
-            <kernel>
-                 linear
-            </kernel>
+            <options>
+                <C>
+                     0.01
+                </C>
+                <kernel>
+                     linear
+                </kernel>
+            </options>
+            <method type="fit">
+                <options>
+                    <X>
+                         X
+                    </X>
+                    <y>
+                         Y
+                    </y>
+                </options>
+            </method>
+            <method type="score">
+                <options>
+                    <X>
+                         X
+                    </X>
+                    <y>
+                         Y
+                    </y>
+                </options>
+            </method>
         </plugin>
     </Modelling>
     <Output name="Output">
+        <inputdata>
+            <X module="Modelling" />
+        </inputdata>
         <relationships>
             <parent name="Modelling" />
         </relationships>
         <coordinates>
-            [(350.0,650),1,{2:'d2-u1'}]
+            [(350.0, 650), 1, {2: 'd2-u1'}]
         </coordinates>
         <plugin type="Output">
-            <outdata>
-                Modelling
-            </outdata>
-            <outpath>
-                 .\examples\results\output.pkl
-            </outpath>
+            <options>
+                <outdata>
+                    Modelling
+                </outdata>
+                <outpath>
+                     .\examples\results\output.pkl
+                </outpath>
+            </options>
         </plugin>
     </Output>
 </pipeline>
diff --git a/src/vai_lab/examples/xml_files/canvas_demo.xml b/src/vai_lab/examples/xml_files/canvas_demo.xml
index d9d4859d..439fbedc 100644
--- a/src/vai_lab/examples/xml_files/canvas_demo.xml
+++ b/src/vai_lab/examples/xml_files/canvas_demo.xml
@@ -1,44 +1,49 @@
 <pipeline>
     <Initialiser name="Initialiser">
-        <inputdata>
-            <X file="./examples/state-action/X_data.csv" />
-        </inputdata>
         <relationships>
-            <child name="My First UserFeedback Module" />
+            <child name="User Interaction" />
         </relationships>
         <coordinates>
-            [(350.0,50),0,{}]
+            [(350.0, 50), 0, {}]
         </coordinates>
+        <inputdata>
+            <X file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/state-action/X_data.csv" />
+        </inputdata>
     </Initialiser>
-    <UserInteraction name="My First UserFeedback Module">
-        <plugin type="CanvasInput">
-            <some_param val="2" />
-        </plugin>
+    <UserInteraction name="User Interaction">
+        <inputdata>
+            <X module="Initialiser" />
+        </inputdata>
         <relationships>
             <parent name="Initialiser" />
             <child name="Output" />
-        </relationships>        
+        </relationships>
         <coordinates>
-            [(350.0,350.0),2,{0:'d0-u2'}]
-        </coordinates>        
+            [(350.0, 350.0), 2, {0: 'd0-u2'}]
+        </coordinates>
+        <plugin type="CanvasInput">
+            <options />
+        </plugin>
+    </UserInteraction>
+    <Output name="Output">
         <inputdata>
-            <X module="Initialiser" />
+            <X module="User Interaction" />
         </inputdata>
-    </UserInteraction>
-    <Output>
-        <plugin type="Output">
-            <outdata>
-                My First UserFeedback Module
-            </outdata>
-            <outpath>
-                 .\examples\results\output.pkl
-            </outpath>
-        </plugin>
         <relationships>
-            <parent name="My First UserFeedback Module" />
+            <parent name="User Interaction" />
         </relationships>
         <coordinates>
-            [(350.0,650),1,{2:'d2-u1'}]
+            [(350.0, 650), 1, {2: 'd2-u1'}]
         </coordinates>
+        <plugin type="Output">
+            <options>
+                <outdata>
+                    User Interaction
+                </outdata>
+                <outpath>
+                     .\examples\results\output.pkl
+                </outpath>
+            </options>
+        </plugin>
     </Output>
 </pipeline>
diff --git a/src/vai_lab/examples/xml_files/k-mean_clustering_demo.xml b/src/vai_lab/examples/xml_files/k-mean_clustering_demo.xml
index 658fc9db..778d8f54 100644
--- a/src/vai_lab/examples/xml_files/k-mean_clustering_demo.xml
+++ b/src/vai_lab/examples/xml_files/k-mean_clustering_demo.xml
@@ -4,57 +4,94 @@
             <child name="Data Processing" />
         </relationships>
         <coordinates>
-            [(350.0,50),0,{}]
+            [(350.0, 50), 0, {}]
         </coordinates>
         <inputdata>
-            <X file="./examples/supervised_regression/X_tr.csv" />
-            <X_test file="./examples/supervised_regression/X_tst.csv" />
+            <X file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_regression/X_tr.csv" />
+            <X_test file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_regression/X_tst.csv" />
         </inputdata>
     </Initialiser>
     <DataProcessing name="Data Processing">
+        <inputdata>
+            <X module="Initialiser" />
+        </inputdata>
         <relationships>
             <parent name="Initialiser" />
             <child name="Modelling" />
         </relationships>
         <coordinates>
-            [(350,200),2,{0:'d0-u2'}]
+            [(227, 254), 2, {0: 'd0-u2'}]
         </coordinates>
-        <inputdata>
-            <X module="Initialiser" />
-        </inputdata>
         <plugin type="MinMaxScaler">
-            <Data>
-                 X
-            </Data>
+            <options>
+                <feature_range>
+                     (0, 1)
+                </feature_range>
+            </options>
+            <method type="fit">
+                <options>
+                    <X>
+                         X
+                    </X>
+                </options>
+            </method>
         </plugin>
     </DataProcessing>
     <Modelling name="Modelling">
+        <inputdata>
+            <X module="Data Processing" />
+        </inputdata>
         <relationships>
             <parent name="Data Processing" />
             <child name="Output" />
         </relationships>
         <coordinates>
-            [(350.0,350.0),3,{2:'d2-u3'}]
+            [(474, 412), 3, {2: 'd2-u3'}]
         </coordinates>
-        <inputdata>
-            <X module="Data Processing" />
-        </inputdata>
-        <plugin type="KMeans" />
+        <plugin type="KMeans">
+            <options>
+                <n_clusters>
+                     4
+                </n_clusters>
+                <max_iter>
+                     500
+                </max_iter>
+            </options>
+            <method type="fit">
+                <options>
+                    <X>
+                         X
+                    </X>
+                </options>
+            </method>
+            <method type="predict">
+                <options>
+                    <X>
+                         X
+                    </X>
+                </options>
+            </method>
+        </plugin>
     </Modelling>
     <Output name="Output">
+        <inputdata>
+            <X module="Modelling" />
+        </inputdata>
         <relationships>
             <parent name="Modelling" />
         </relationships>
         <coordinates>
-            [(350.0,650),1,{3:'d3-u1'}]
+            [(350.0, 650), 1, {3: 'd3-u1'}]
         </coordinates>
         <plugin type="Output">
-            <outdata>
-                Modelling
-            </outdata>
-            <outpath>
-                 .\examples\results\output.pkl
-            </outpath>
+            <options>
+                <outdata>
+                    Modelling
+                </outdata>
+                <outpath>
+                     .\examples\results\output.pkl
+                </outpath>
+            </options>
         </plugin>
     </Output>
 </pipeline>
diff --git a/src/vai_lab/examples/xml_files/pybullet_env_example.xml b/src/vai_lab/examples/xml_files/pybullet_env_example.xml
index 53629908..41e8a999 100644
--- a/src/vai_lab/examples/xml_files/pybullet_env_example.xml
+++ b/src/vai_lab/examples/xml_files/pybullet_env_example.xml
@@ -15,25 +15,27 @@
         <coordinates>
             [(350.0,350.0),2,{0:'d0-u2'}]
         </coordinates>
-        <plugin type="PyBullet">
-            <model_dir>
-                 plane.urdf
-                 ./Environment/resources/models/half_cheetah_with_mass.xml
-            </model_dir>
-            <usegui>
-                 False
-            </usegui>
-            <setGravity>
-                    0.0
-                    0.0
-                    -9.81
-            </setGravity>
-            <timestep>
-                    0.01
-            </timestep>
-            <max_steps>
-                    10
-            </max_steps>            
+        <plugin type="PyBullet">           
+            <options>
+                <model_dir>
+                    plane.urdf
+                    ./Environment/resources/models/half_cheetah_with_mass.xml
+                </model_dir>
+                <usegui>
+                    False
+                </usegui>
+                <setGravity>
+                        0.0
+                        0.0
+                        -9.81
+                </setGravity>
+                <timestep>
+                        0.01
+                </timestep>
+                <max_steps>
+                        10
+                </max_steps>  
+            </options>
         </plugin>
         <inputdata>
             <X module="Initialiser" />
@@ -41,12 +43,14 @@
     </Environment>
     <Output name="Output">
         <plugin type="Output">
-            <outdata>
-                MyEnv
-            </outdata>
-            <outpath>
-                 .\examples\results\output.pkl
-            </outpath>
+            <options>
+                <outdata>
+                    MyEnv
+                </outdata>
+                <outpath>
+                     .\examples\results\output.pkl
+                </outpath>
+            </options>
         </plugin>
         <relationships>
             <parent name="MyEnv" />
diff --git a/src/vai_lab/examples/xml_files/random_forest_class_demo.xml b/src/vai_lab/examples/xml_files/random_forest_class_demo.xml
index 42d4e203..aa4d8ab0 100644
--- a/src/vai_lab/examples/xml_files/random_forest_class_demo.xml
+++ b/src/vai_lab/examples/xml_files/random_forest_class_demo.xml
@@ -1,62 +1,108 @@
 <pipeline>
     <Initialiser name="Initialiser">
         <relationships>
-            <child name="My Data Processing" />
+            <child name="Data Processing" />
         </relationships>
-		<inputdata>
-            <X file="./examples/supervised_classification/X_tr.csv"/>
-            <Y file="./examples/supervised_classification/Y_tr.csv"/>
-            <X_test file="./examples/supervised_classification/X_tst.csv"/>
-            <Y_test file="./examples/supervised_classification/Y_tst.csv"/>
-        </inputdata>
         <coordinates>
-            [(350.0,50),0,{}]
+            [(350.0, 50), 0, {}]
         </coordinates>
+        <inputdata>
+            <X file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_classification/X_tr.csv" />
+            <Y file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_classification/Y_tr.csv" />
+            <X_test file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_classification/X_tst.csv" />
+            <Y_test file="C:/Users/sevisal/Documents/GitHub/ai-assisted-design-framework/src/vai_lab/examples/supervised_classification/Y_tst.csv" />
+        </inputdata>
     </Initialiser>
-  
-    <DataProcessing name="My Data Processing">
+    <DataProcessing name="Data Processing">
+        <inputdata>
+            <X module="Initialiser" />
+        </inputdata>
         <relationships>
             <parent name="Initialiser" />
-            <child name="My Modelling Module" />
+            <child name="Modelling" />
         </relationships>
+        <coordinates>
+            [(349, 207), 2, {0: 'd0-u2'}]
+        </coordinates>
         <plugin type="StandardScaler">
-            <Data>
-                X
-            </Data>
+            <options />
+            <method type="fit">
+                <options>
+                    <X>
+                         X
+                    </X>
+                </options>
+            </method>
+            <method type="transform">
+                <options>
+                    <X>
+                         X
+                    </X>
+                </options>
+            </method>
         </plugin>
+    </DataProcessing>
+    <Modelling name="Modelling">
         <inputdata>
-            <X module="Initialiser" />
+            <X module="Data Processing" />
         </inputdata>
-    </DataProcessing>
-  
-    <Modelling name="My Modelling Module">
         <relationships>
-            <parent name="My Data Processing" />
+            <parent name="Data Processing" />
             <child name="Output" />
         </relationships>
-        <plugin type="RandomForestClassifier" />
-        <inputdata>
-            <X module="My Data Processing" />
-        </inputdata>        
         <coordinates>
-            [(350.0,350.0),2,{0:'d0-u2'}]
+            [(349, 419), 3, {2: 'd2-u3'}]
         </coordinates>
+        <plugin type="RandomForestClassifier">
+            <options>
+                <n_estimators>
+                     50
+                </n_estimators>
+                <max_depth>
+                     500
+                </max_depth>
+            </options>
+            <method type="fit">
+                <options>
+                    <X>
+                         X
+                    </X>
+                    <y>
+                         Y
+                    </y>
+                </options>
+            </method>
+            <method type="score">
+                <options>
+                    <X>
+                         X
+                    </X>
+                    <y>
+                         Y
+                    </y>
+                </options>
+            </method>
+        </plugin>
     </Modelling>
-  
     <Output name="Output">
-        <coordinates>
-            [(350.0,650),1,{2:'d2-u1'}]
-        </coordinates>
+        <inputdata>
+            <X module="Modelling" />
+        </inputdata>
         <relationships>
-            <parent name="My Modelling Module" />
+            <parent name="Modelling" />
         </relationships>
+        <coordinates>
+            [(350.0, 650), 1, {3: 'd3-u1'}]
+        </coordinates>
         <plugin type="Output">
-            <outdata>
-                My Modelling Module
-            </outdata>
-            <outpath>
-                 .\examples\results\output.pkl
-            </outpath>
+            <options>
+                <outdata>
+                    Modelling
+                </outdata>
+                <outpath>
+                     .\examples\results\output.pkl
+                </outpath>
+            </options>
         </plugin>
     </Output>
 </pipeline>
diff --git a/src/vai_lab/examples/xml_files/regression_demo.xml b/src/vai_lab/examples/xml_files/regression_demo.xml
deleted file mode 100644
index 38faeca5..00000000
--- a/src/vai_lab/examples/xml_files/regression_demo.xml
+++ /dev/null
@@ -1,44 +0,0 @@
-<pipeline>
-    <Initialiser name="Initialiser">
-        <relationships>
-            <child name="Modelling" />
-        </relationships>
-        <coordinates>
-            [(350.0,50),0,{}]
-        </coordinates>
-        <inputdata>
-            <X file="./examples/supervised_regression/data_1D_simple/x_train.csv" />
-            <Y file="./examples/supervised_regression/data_1D_simple/y_train.csv" />
-        </inputdata>
-    </Initialiser>
-    <Modelling name="Modelling">
-        <relationships>
-            <parent name="Initialiser" />
-            <child name="Output" />
-        </relationships>
-        <coordinates>
-            [(350.0,350.0),2,{0:'d0-u2'}]
-        </coordinates>
-        <plugin type="LinearRegression">
-        </plugin>
-        <inputdata>
-            <X module="Initialiser" />
-        </inputdata>
-    </Modelling>
-    <Output name="Output">        
-        <plugin type="Output">
-            <outdata>
-                Modelling
-            </outdata>
-            <outpath>
-                 .\examples\results\output.pkl
-            </outpath>
-        </plugin>
-        <relationships>
-            <parent name="Modelling" />
-        </relationships>
-        <coordinates>
-            [(350.0,650),1,{2:'d2-u1'}]
-        </coordinates>
-    </Output>
-</pipeline>
diff --git a/src/vai_lab/examples/xml_files/ridge-scalar-ridge_demo.xml b/src/vai_lab/examples/xml_files/ridge-scalar-ridge_demo.xml
index c98d1191..c3544328 100644
--- a/src/vai_lab/examples/xml_files/ridge-scalar-ridge_demo.xml
+++ b/src/vai_lab/examples/xml_files/ridge-scalar-ridge_demo.xml
@@ -4,81 +4,138 @@
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deleted file mode 100644
index 58e182f7..00000000
--- a/src/vai_lab/examples/xml_files/ridge_regression_demo.xml
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deleted file mode 100644
index 5b2b1d9a..00000000
--- a/src/vai_lab/examples/xml_files/scalar_demo.xml
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deleted file mode 100644
index a05d1bfa..00000000
--- a/src/vai_lab/examples/xml_files/scaler-lasso_demo.xml
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diff --git a/src/vai_lab/examples/xml_files/user_feedback_demo2.xml b/src/vai_lab/examples/xml_files/user_feedback_demo.xml
similarity index 74%
rename from src/vai_lab/examples/xml_files/user_feedback_demo2.xml
rename to src/vai_lab/examples/xml_files/user_feedback_demo.xml
index bfe76cc7..7b1ca210 100644
--- a/src/vai_lab/examples/xml_files/user_feedback_demo2.xml
+++ b/src/vai_lab/examples/xml_files/user_feedback_demo.xml
@@ -1,15 +1,15 @@
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         <relationships>
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         <coordinates>
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+            <Y file="./examples/image_classification/Y_data.csv" />
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     <UserInteraction name="User Interaction">
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-        <plugin type="ManualInput" />
+        <plugin type="ManualInput">
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     </UserInteraction>
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