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BM32ESRF · Mar 6, 2023 · 63b2a00 · 63b2a00
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diff --git a/LaueTools/Daxm/modules/__init__.py b/LaueTools/Daxm/modules/__init__.py
diff --git a/LaueTools/Daxm/scripts/__init__.py b/LaueTools/Daxm/scripts/__init__.py
diff --git a/LaueTools/FileSeries/Build_Summary.py b/LaueTools/FileSeries/Build_Summary.py
diff --git a/LaueTools/FileSeries/Index_Refine.py b/LaueTools/FileSeries/Index_Refine.py
diff --git a/LaueTools/FileSeries/Peak_Search.py b/LaueTools/FileSeries/Peak_Search.py
diff --git a/LaueTools/FileSeries/Plot_Maps2.py b/LaueTools/FileSeries/Plot_Maps2.py
diff --git a/LaueTools/FileSeries/__init__.py b/LaueTools/FileSeries/__init__.py
diff --git a/LaueTools/FileSeries/mainFileSeriesGUI.py b/LaueTools/FileSeries/mainFileSeriesGUI.py
diff --git a/LaueTools/FileSeries/module_graphique.py b/LaueTools/FileSeries/module_graphique.py
diff --git a/LaueTools/FileSeries/param_multigrain.py b/LaueTools/FileSeries/param_multigrain.py
diff --git a/LaueTools/FitOrient.py b/LaueTools/FitOrient.py
diff --git a/LaueTools/GUI/AutoindexationGUI.py b/LaueTools/GUI/AutoindexationGUI.py
diff --git a/LaueTools/GUI/B0matrixLatticeEditor.py b/LaueTools/GUI/B0matrixLatticeEditor.py
diff --git a/LaueTools/GUI/CCDFileParametersGUI.py b/LaueTools/GUI/CCDFileParametersGUI.py
diff --git a/LaueTools/GUI/DetectorCalibration.py b/LaueTools/GUI/DetectorCalibration.py
diff --git a/LaueTools/GUI/DetectorParameters.py b/LaueTools/GUI/DetectorParameters.py
diff --git a/LaueTools/GUI/HistogramPlot.py b/LaueTools/GUI/HistogramPlot.py
diff --git a/LaueTools/GUI/ImshowFrame.py b/LaueTools/GUI/ImshowFrame.py
diff --git a/LaueTools/GUI/LaueSimulatorGUI.py b/LaueTools/GUI/LaueSimulatorGUI.py
@@ -1555,6 +1555,7 @@ def OnSimulate(self, evt):
         # simulation in class parametric_Grain_Dialog3
 
         self.calib = [self.Det_distance, self.Xcen, self.Ycen, self.Xbet, self.Xgam]
+
         data_res = MGS.dosimulation_parametric(list_param,
                                                 emax=self.emax,
                                                 emin=self.emin,

diff --git a/LaueTools/GUI/LaueSpotsEditor.py b/LaueTools/GUI/LaueSpotsEditor.py
diff --git a/LaueTools/GUI/ManualIndexFrame.py b/LaueTools/GUI/ManualIndexFrame.py
diff --git a/LaueTools/GUI/MatrixEditor.py b/LaueTools/GUI/MatrixEditor.py
diff --git a/LaueTools/GUI/OpenSpotsListFileGUI.py b/LaueTools/GUI/OpenSpotsListFileGUI.py
diff --git a/LaueTools/GUI/PeakSearchGUI.py b/LaueTools/GUI/PeakSearchGUI.py
diff --git a/LaueTools/GUI/PeaksListBoard.py b/LaueTools/GUI/PeaksListBoard.py
diff --git a/LaueTools/GUI/Plot1DFrame.py b/LaueTools/GUI/Plot1DFrame.py
diff --git a/LaueTools/GUI/PlotLimitsBoard.py b/LaueTools/GUI/PlotLimitsBoard.py
diff --git a/LaueTools/GUI/PlotRefineGUI.py b/LaueTools/GUI/PlotRefineGUI.py
diff --git a/LaueTools/GUI/ProportionalSplitter.py b/LaueTools/GUI/ProportionalSplitter.py
diff --git a/LaueTools/GUI/ResultsIndexationGUI.py b/LaueTools/GUI/ResultsIndexationGUI.py
diff --git a/LaueTools/GUI/SimulFrame.py b/LaueTools/GUI/SimulFrame.py
diff --git a/LaueTools/GUI/__init__.py b/LaueTools/GUI/__init__.py
diff --git a/LaueTools/GUI/mainGUI.py b/LaueTools/GUI/mainGUI.py
diff --git a/LaueTools/GUI/mosaic.py b/LaueTools/GUI/mosaic.py
diff --git a/LaueTools/GUI/plotmeshspecGUI.py b/LaueTools/GUI/plotmeshspecGUI.py
diff --git a/LaueTools/GUI/spotslinkeditor.py b/LaueTools/GUI/spotslinkeditor.py
diff --git a/LaueTools/GUI/threadGUI2.py b/LaueTools/GUI/threadGUI2.py
diff --git a/LaueTools/IOLaueTools.py b/LaueTools/IOLaueTools.py
@@ -451,6 +451,8 @@ def readCalibParametersInFile(openfile, Dict_to_update=None, guessCCDLabel=True)
                     ccdlabel = 'IMSTAR_bin2'
                 elif abs(ps-0.0252) <= 0.001:
                     ccdlabel = 'IMSTAR_bin1'
+                elif abs(ps-0.2) <= 0.001:
+                    ccdlabel = 'Alban'
 
 
                 CCDcalib['CCDLabel'] = ccdlabel
@@ -825,7 +827,7 @@ def writefitfile(outputfilename, datatooutput, nb_of_indexedSpots,
 
     if "UBB0" in dict_matrices:
         footer += "UBB0 matrix in q= (UB B0) G* i.e. recip. basis vectors are columns "
-        footer += "in LT frame: astar = UBB0[0,:], bstar = UBB0[1,:], cstar = UBB0[2,:]. (abcstar as columns on xyzlab1, "
+        footer += "in LT frame: astar = UBB0[:,0], bstar = UBB0[:,1], cstar = UBB0[:,2]. (abcstar as columns on xyzlab1, "
         footer += "xlab1 = ui, ui = unit vector along incident beam)\n"
         footer += str(dict_matrices["UBB0"].round(decimals=8)) + "\n"
 

diff --git a/LaueTools/IOimagefile.py b/LaueTools/IOimagefile.py
@@ -781,7 +781,7 @@ def readCCDimage(filename, CCDLabel="MARCCD165", dirname=None, stackimageindex=-
     if FABIO_EXISTS:
         if CCDLabel in ('MARCCD165', "EDF", "EIGER_4M", "EIGER_1M","IMSTAR_bin2","IMSTAR_bin1",
                         "sCMOS", "sCMOS_fliplr", "sCMOS_fliplr_16M", "sCMOS_16M",
-                        "Rayonix MX170-HS", 'psl_weiwei', 'ImageStar_dia_2021','ImageStar_dia_2021_2x2'):
+                        "Rayonix MX170-HS", 'psl_weiwei', 'ImageStar_dia_2021','ImageStar_dia_2021_2x2', 'Alban'):
 
             if verbose > 1:
                 print('----> Using fabio ... to open %s\n'%filename)

diff --git a/LaueTools/LaueAutoAnalysis.py b/LaueTools/LaueAutoAnalysis.py
diff --git a/LaueTools/LaueGeometry.py b/LaueTools/LaueGeometry.py
diff --git a/LaueTools/LaueImages/AH12_CMT_r14_0200.tif b/LaueTools/LaueImages/AH12_CMT_r14_0200.tif
diff --git a/LaueTools/LaueImages/CdTe_I999_03Jul06_0200.mccd b/LaueTools/LaueImages/CdTe_I999_03Jul06_0200.mccd
diff --git a/LaueTools/LaueImages/Ge_blanc_0000.dat b/LaueTools/LaueImages/Ge_blanc_0000.dat
diff --git a/LaueTools/LaueImages/Ge_blanc_0000.mccd b/LaueTools/LaueImages/Ge_blanc_0000.mccd
diff --git a/LaueTools/LaueImages/SS_0171.mccd b/LaueTools/LaueImages/SS_0171.mccd
diff --git a/LaueTools/LaueImages/calibGe111.det b/LaueTools/LaueImages/calibGe111.det
diff --git a/LaueTools/LaueToolsGUI.py b/LaueTools/LaueToolsGUI.py
diff --git a/LaueTools/Lauehdf5.py b/LaueTools/Lauehdf5.py
diff --git a/LaueTools/MessageCommand.py b/LaueTools/MessageCommand.py
diff --git a/LaueTools/dict_LaueTools.py b/LaueTools/dict_LaueTools.py
@@ -35,10 +35,11 @@
     "FeAl": ["FeAl", [5.871, 5.871, 5.871, 90, 90, 90], "fcc"],
     "Fe2Ta": ["Fe2Ta", [4.83, 4.83, 0.788, 90, 90, 120], "no"],
     "Si": ["Si", [5.4309, 5.4309, 5.4309, 90, 90, 90], "dia"],
-    "3H-SiC": ["3H-SiC", [4.3596, 4.3596, 4.3596, 90, 90, 90], "dia"],  # zinc blende
-    "4H-SiC": ["4H-SiC", [3.073, 3.073, 10.053, 90, 90, 120], "wurtzite"],  # wurtzite  = 6H-SiC also
+    "3H-SiC": ["3H-SiC", [4.3596, 4.3596, 4.3596, 90, 90, 90], "dia"],  # zinc blende  SG 216
+    "4H-SiC": ["4H-SiC", [3.073, 3.073, 10.053, 90, 90, 120], "wurtzite"],  # wurtzite  = 6H-SiC also  SG 186
     "CdHgTe": ["CdHgTe", [6.46678, 6.46678, 6.46678, 90, 90, 90], "dia"],
     "CdHgTe_fcc": ["CdHgTe_fcc", [6.46678, 6.46678, 6.46678, 90, 90, 90], "fcc"],
+    "Cr": ["Cr", [2.87, 2.87, 2.87, 90, 90, 90], "fcc"],  # 229
     "Ge": ["Ge", [5.6575, 5.6575, 5.6575, 90, 90, 90], "dia"],
     "Getest": ["Getest", [5.6575, 5.6575, 5.6574, 90, 90, 90], "dia", ],  # c is slightly lower
     "Au": ["Au", [4.078, 4.078, 4.078, 90, 90, 90], "fcc"],
@@ -55,6 +56,7 @@
     "CCDL1949": ["CCDL1949", [9.89, 17.85, 5.31, 90, 180 - 72.5, 90], "h+k=2n"],
     "Crocidolite_small": ["Crocidolite_small", [9.76 / 3, 17.93 / 3, 5.35 / 3, 90, 103.6, 90], "no", ],  # a= 9.811, b=18.013, c= 5.326A, beta=103,68°
     "Hematite": ["Hematite", [5.03459, 5.03459, 13.7533, 90, 90, 120], "no", ],  # extinction for h+k+l=3n and always les l=2n
+    "Mg":["Mg",[3.2095,3.2095,5.2104,90,90,120],"no"],
     "Magnetite_fcc": ["Magnetite_fcc", [8.391, 8.391, 8.391, 90, 90, 90], "fcc", ],  # GS 225 fcc extinction
     "Magnetite": ["Magnetite", [8.391, 8.391, 8.391, 90, 90, 90], "dia"],  # GS 227
     "Magnetite_sc": ["Magnetite_sc", [8.391, 8.391, 8.391, 90, 90, 90], "no", ],  # no extinction
@@ -126,6 +128,8 @@
     "ZnCuOCl": ["ZnCuOCl", [6.839, 6.839, 14.08, 90.0, 90, 120.0], "SG166"],
     "ZnCuOCl_all": ["ZnCuOCl_all", [6.839, 6.839, 14.08, 90.0, 90, 120.0], "no"],
     "FePS3": ["FePS3", [5, 10, 7, 90, 107, 90], "no"],
+    "Zr": ["Zr", [3.24, 3.24, 5.17, 90, 90, 120], "no"],  # 194 
+    "Nb14W3O44": ["Nb14W3O44", [21.03,21.03,3.93,90, 90, 90], "h+k+l=2n"], #SG 82
 }
 
 dict_Materials_short = {
@@ -357,6 +361,7 @@ def readsinglelinedictfile(line):
     "VHR_Feb13_rawtiff": ((2594, 2774), 0.031, 10000, "VHR_Feb13", 110, "uint16", " ", "tiff"),
     "VHR_PSI": ((2615, 3891), 0.0312, 65000, "no", 4096, "uint16", "vhr at psi actually read by libtiff (variable header size and compressed data)", "tif"),
     "VHR_DLS": ((3056, 3056), 0.0312, 65000, "no", 4096, "uint16", "vhr at dls actually read by libtiff (variable header size and compressed data)", "tif"),
+    "Alban": [(1504, 1499), 0.2, 65535, "no", -1, "uint16", "Alban de vaucorbeil detector australia", "tif"],
     "PRINCETON": ((2048, 2048), 0.079, 57000, "no", 4096, "uint16", "ROPER Princeton Quadro 2048x2048 pixels converted from .spe to .mccd", "mccd"),  # 2X2, saturation value depends on gain and DAC
     "FRELON": ((2048, 2048), 0.048, 65000, "frelon2", 1024, "uint16", "FRELON camera 2048x2048 pixels, 2theta axis is horizontal (edf format)", "edf"),
     "TIFF Format": (-1, -1, "", "", "", "" "CCD parameters read from tiff header", "tiff", ),

diff --git a/LaueTools/dragpoints.py b/LaueTools/dragpoints.py
diff --git a/LaueTools/elasticity.py b/LaueTools/elasticity.py
diff --git a/LaueTools/findorient.py b/LaueTools/findorient.py
diff --git a/LaueTools/fit2Dintensity.py b/LaueTools/fit2Dintensity.py
diff --git a/LaueTools/fit2Dintensity_Lorentz.py b/LaueTools/fit2Dintensity_Lorentz.py
diff --git a/LaueTools/generaltools.py b/LaueTools/generaltools.py
diff --git a/LaueTools/graingraph.py b/LaueTools/graingraph.py
diff --git a/LaueTools/icons/down2.png b/LaueTools/icons/down2.png
diff --git a/LaueTools/icons/exit.png b/LaueTools/icons/exit.png
diff --git a/LaueTools/icons/left2.png b/LaueTools/icons/left2.png
diff --git a/LaueTools/icons/right2.png b/LaueTools/icons/right2.png
diff --git a/LaueTools/icons/save.png b/LaueTools/icons/save.png
diff --git a/LaueTools/icons/transmissionLaue.png b/LaueTools/icons/transmissionLaue.png
diff --git a/LaueTools/icons/transmissionLaue_fcc_111.png b/LaueTools/icons/transmissionLaue_fcc_111.png
diff --git a/LaueTools/icons/transmissionLauesmall.png b/LaueTools/icons/transmissionLauesmall.png
diff --git a/LaueTools/icons/up2.png b/LaueTools/icons/up2.png
diff --git a/LaueTools/imageprocessing.py b/LaueTools/imageprocessing.py
diff --git a/LaueTools/indexingAnglesLUT.py b/LaueTools/indexingAnglesLUT.py
diff --git a/LaueTools/indexingImageMatching.py b/LaueTools/indexingImageMatching.py
diff --git a/LaueTools/indexingSpotsSet.py b/LaueTools/indexingSpotsSet.py
diff --git a/LaueTools/indexrefine.py b/LaueTools/indexrefine.py
diff --git a/LaueTools/lauecore.py b/LaueTools/lauecore.py
@@ -660,6 +660,7 @@ def create_spot(pos_vec, miller, detectordistance, allattributes=False, pixelsiz
                                                                                 dim=(2048, 2048)):
     r""" From reciprocal space position and 3 miller indices
     create a spot instance (on top camera geometry)
+    warning: by default only 1 attribute: Qxyz vector 
 
     :param pos_vec: 3D vector
     :type pos_vec: list of 3 float
@@ -713,6 +714,8 @@ def create_spot_np(Qxyz, miller, detectordistance, allattributes=False,
     :return: spot instance
 
     .. note:: spot.Qxyz is a vector expressed in lauetools frame
+    .. note:: spot pixel cam positions are not calculated here.
+
 
     X along x-ray and Z towards CCD when CCD on top and y towards experimental hutch door
     """
@@ -759,7 +762,7 @@ def create_spot_4pi(pos_vec, miller, detectordistance, allattributes=0, pixelsiz
 
 
 def create_spot_side_pos(pos_vec, miller, detectordistance,
-                                        allattributes=0,
+                                        allattributes=False,
                                         pixelsize=165.0 / 2048,
                                         dim=(2048, 2048)):
     r""" From reciprocal space position and 3 miller indices
@@ -775,7 +778,7 @@ def create_spot_side_pos(pos_vec, miller, detectordistance,
             + spotty.Qxyz[1] ** 2
             + spotty.Qxyz[2] ** 2)
 
-        if not allattributes:
+        if allattributes:
             X = (detectordistance * (spotty.Qxyz[0] + spotty.EwaldRadius) / spotty.Qxyz[1])
             Y = detectordistance * (spotty.Qxyz[2]) / spotty.Qxyz[1]
             #             spotty.Xcam = X / pixelsize + dim[0] / 2
@@ -808,7 +811,7 @@ def create_spot_side_neg(pos_vec, miller, detectordistance, allattributes=0, pix
             + spotty.Qxyz[1] ** 2
             + spotty.Qxyz[2] ** 2)
 
-        if not allattributes:
+        if allattributes:
             X = (-detectordistance * (spotty.Qxyz[0] + spotty.EwaldRadius) / spotty.Qxyz[1])
             Y = detectordistance * (spotty.Qxyz[2]) / spotty.Qxyz[1]
             spotty.Xcam = X / pixelsize + dim[0] / 2.0
@@ -826,6 +829,8 @@ def create_spot_front(pos_vec, miller, detectordistance, allattributes=0,
                                                         dim=(2048, 2048)):
     r""" From reciprocal space position and 3 miller indices
     create a spot on forward direction transmission geometry
+
+    .. note: at this step: crude Xcam Ycam spot attributes with ideal detector pointing towards sample
     """
     #     print "use create_spot_front"
     spotty = spot(miller)
@@ -861,10 +866,13 @@ def create_spot_front(pos_vec, miller, detectordistance, allattributes=0,
         return None
 
 
-def create_spot_back(pos_vec, miller, detectordistance, allattributes=0,
+def create_spot_back(pos_vec, miller, detectordistance, allattributes=False,
                                                         pixelsize=165.0 / 2048, dim=(2048, 2048)):
     r""" From reciprocal space position and 3 miller indices
     create a spot on backward directions i.e.  back reflection geometry
+
+    .. note: at this step: crude Xcam Ycam spot attributes with ideal detector pointing towards sample
+
     """
     spotty = spot(miller)
     spotty.Qxyz = pos_vec
@@ -874,7 +882,7 @@ def create_spot_back(pos_vec, miller, detectordistance, allattributes=0,
         abskx = math.fabs(spotty.Qxyz[0] + spotty.EwaldRadius)
         normkout = math.sqrt(abskx ** 2 + spotty.Qxyz[1] ** 2 + spotty.Qxyz[2] ** 2)
 
-        if not allattributes:
+        if allattributes:
             X = detectordistance * (spotty.Qxyz[1]) / abskx
             Y = detectordistance * (spotty.Qxyz[2]) / abskx
             spotty.Xcam = X / pixelsize + dim[0] / 2.0
@@ -1389,7 +1397,9 @@ def get2ThetaChi_geometry(oncam_vec, oncam_HKL, detectordistance=DEFAULT_DETECTO
                                                                 kf_direction=DEFAULT_TOP_GEOMETRY):
     r"""
     computes list of spots instances from oncam_vec (q 3D vectors)
-    and oncam_HKL (miller indices 3D vectors)
+    and oncam_HKL (miller indices 3D vectors), with crude Xcam Ycam pixel positions for ideal plan detector
+
+    Warning: pixel X,Y peaks positions (Xcam and YCam) are roughly computed for perfect detector plane pointing towards sample. For kf_direction Z>0, pixel position is evaluated precisely later with a LaueGeomtry module's function calc_xycam_from_2thetachi()
 
     :param oncam_vec: q vectors [qx,qy,qz] (corresponding to kf collected on camera)
     :type oncam_vec: array with 3D elements (shape = (n,3))
@@ -1420,8 +1430,13 @@ def get2ThetaChi_geometry(oncam_vec, oncam_HKL, detectordistance=DEFAULT_DETECTO
     if len(oncam_vec) != len(oncam_HKL):
         raise ValueError("Wrong input for get2ThetaChi_geometry()")
 
+    COMPUTE_ALL_SPOTATTRIBUTES = False
+
+    if kf_direction in ('Y>0', 'Y>0'):
+        COMPUTE_ALL_SPOTATTRIBUTES = True
+
     listspot = []
-    options_createspot = {"allattributes": 0, "pixelsize": pixelsize, "dim": dim}
+    options_createspot = {"allattributes": COMPUTE_ALL_SPOTATTRIBUTES, "pixelsize": pixelsize, "dim": dim}
 
     dictcase = {"Z>0": create_spot,   # top reflection geom
                 "Y>0": create_spot_side_pos,  # side + reflection geom
@@ -1816,6 +1831,15 @@ def SimulateLaue(grain, emin, emax, detectorparameters, kf_direction=DEFAULT_TOP
                                                 pixelsize=pixelsize,
                                                 kf_direction=kf_direction, version=version)[:2]
 
+    print('posx, posy with calc_xycam_from2thetachi() ',posx[:5],posy[:5])
+
+    if kf_direction in ('Y>0', 'Y<0'):
+
+        posx = [spot.Xcam for spot in ListofSpots]
+        posy = [spot.Ycam for spot in ListofSpots]
+
+        print('posx, posy with Xcam and Ycam atttibutes',posx[:5],posy[:5])
+
     return Twicetheta, Chi, Miller_ind, posx, posy, Energy
 
 

diff --git a/LaueTools/lauetools.py b/LaueTools/lauetools.py
diff --git a/LaueTools/logfile_reader.py b/LaueTools/logfile_reader.py
diff --git a/LaueTools/mapanalyzer.py b/LaueTools/mapanalyzer.py
diff --git a/LaueTools/matchingrate.py b/LaueTools/matchingrate.py
diff --git a/LaueTools/multigrainsSimulator.py b/LaueTools/multigrainsSimulator.py
@@ -103,6 +103,15 @@ def dosimulation_parametric(_list_param, Transform_params=None, SelectGrains=Non
     """
     print("\n\n********* Starting dosimulation_parametric *********\n\n")
 
+    # print('_list_param',_list_param)
+    # print('SelectGrains',SelectGrains)
+    # print('detectordistance',detectordistance)
+    # print('detectordiameter',detectordiameter)
+    # print('posCEN',posCEN)
+    # print('cameraAngles',cameraAngles)
+    # print('kf_direction',kf_direction)
+    # print('pixelsize',pixelsize)
+
     # Number_ParentGrains parent grains
     Number_ParentGrains = len(_list_param)
 
@@ -496,20 +505,15 @@ def dosimulation_parametric(_list_param, Transform_params=None, SelectGrains=Non
 
                     calib = [detectordistance, posCEN[0], posCEN[1], cameraAngles[0], cameraAngles[1]]
 
-                    posx, posy = LTGeo.calc_xycam_from2thetachi(twicetheta, chi, calib,
-                                        pixelsize=pixelsize,
-                                        kf_direction=kf_direction)[:2]
-                    # posx, posy, theta0 = LTGeo.calc_xycam_from2thetachi(twicetheta, chi, calib, pixelsize = self.pixelsize)
+                    # posx, posy = LTGeo.calc_xycam_from2thetachi(twicetheta, chi, calib,
+                    #                     pixelsize=pixelsize,
+                    #                     kf_direction=kf_direction)[:2]
+                    print('Y>0 2theta ', twicetheta[:5])
 
                     posx = [spot.Xcam for spot in Laue_spot_list[0]]
                     posy = [spot.Ycam for spot in Laue_spot_list[0]]
 
-                    # vecRR = [
-                    #     spot.Qxyz for spot in Laue_spot_list[0]
-                    # ]  # uf_lab in JSM frame
-
-                    # print "twicetheta",twicetheta
-                    # print "2*th0",(2*theta0).tolist()
+                    print('Y>0 posx ', posx[:5])
 
                     list_twicetheta.append(twicetheta)
                     list_chi.append(chi)

diff --git a/LaueTools/orientations.py b/LaueTools/orientations.py
diff --git a/LaueTools/param_multigrain.py b/LaueTools/param_multigrain.py
diff --git a/LaueTools/peaksearch.py b/LaueTools/peaksearch.py
diff --git a/LaueTools/plotmap.py b/LaueTools/plotmap.py
diff --git a/LaueTools/plotmeshspecGUI.py b/LaueTools/plotmeshspecGUI.py
diff --git a/LaueTools/readmccd.py b/LaueTools/readmccd.py
diff --git a/LaueTools/rectangle.py b/LaueTools/rectangle.py
diff --git a/LaueTools/scripts/__init__.py b/LaueTools/scripts/__init__.py
diff --git a/LaueTools/scripts/scripts_findorient.py b/LaueTools/scripts/scripts_findorient.py
diff --git a/LaueTools/scripts/scripts_fitorient.py b/LaueTools/scripts/scripts_fitorient.py
diff --git a/LaueTools/tifffile.py b/LaueTools/tifffile.py