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Software extension for EEGLAB that facilitates the interactive annotation of EEG data files.

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Vised Marks

The Vised Marks extension for EEGLAB adds editing functions to the native eegplot data scrolling figure. Specifically, it allows adding/editing event markers, flagging channels/components, flagging time periods and displaying the properties of the marks structure. This is achieved by providing an interface and "marks" data structure for managing the flagging of channels/components and time periods. This extension also provides tools for epoching the data for artefact detection then concatenating the data back into a continuous form while storing the rejection information in the "marks" structure.

Documentation

This plugin is part of BUCANL's Lossless EEG pipeline. As part of this, all tutorials and documentation are written using the Face13 dataset. Instructions on how to download and initialize this data can be found, here.

The reference manual for this plugin can be found on this repository's accompanying wiki page.

A tutorial with examples using the Face13 data can be found, here.

Installation

This plugin can be installed with the plugin manager via EEGLAB. Additionally it can be installed by navigating to your eeglab/plugins folder and running the following command inside of a terminal:

git clone https://github.com/BUCANL/Vised-Marks.git

⚠️ Set Up Figure Renderer ⚠️

Depending on your operating system and the default setting you are using you may need to type the following code into your MATLAB command window before each session. It mostly appears to be required when running MATLAB versions earlier than 2014b. This will ensure that the plots will open correctly, and you can avoid this error.

set(0, 'DefaultFigureRenderer', 'OpenGL')

Contact us

Please see the Contact Us page if you have any questions.

Attribution

Code initially designed and written by James A. Desjardins (SHARCNET) with contributions from Andrew Lofts, Allan Campopiano, Mae Kennedy, Tyler Collins, Sara Stephenson, and Mike Cichonski supported by NSERC to Sidney J. Segalowitz at the Jack and Nora Walker Centre for Lifespan Development Research (Brock University), Brain Canada funding to Alan C. Evans at the Montreal Neurological Institute and Hospital (McGill University), and a Dedicated Programming award from SHARCNET, Compute Ontario.

License / Copyright

Copyright (C) 2017 James Desjardins and others. This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program (LICENSE.txt file in the root directory); if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA

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Software extension for EEGLAB that facilitates the interactive annotation of EEG data files.

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