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CRISPRloci-env.yml
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CRISPRloci-env.yml
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name: CRISPRloci-env
channels:
- conda-forge
- bioconda
- defaults
- biobuilds
- bioconda/label/cf201901
- r
- anaconda
dependencies:
- _tflow_select=2.3.0
- biopython=1.76
- h5py=2.10.0
- hdf5=1.10.6
- hmmer=3.3
- numpy=1.18.1
- pandas=1.0.3
- matplotlib=3.1.3
- perl=5.26.2
- perl-compress-bgzf=0.005
- perl-threaded=5.26.0
- perl-yaml=1.29
- prodigal=2.6.3
- dill=0.3.3
- protobuf=3.13.0.1
- regex=2019.03.09
- pthread-stubs=0.4
- pyasn1=0.4.8
- pycparser=2.20
- networkx=2.5
- pyjwt=1.7.1
- pyparsing=2.4.7
- pyqt=5.9.2
- pysocks=1.7.1
- python-dateutil=2.8.1
- python_abi=3.7
- pytz=2020.1
- pyyaml=5.3.1
- scikit-learn=0.22.1
- scipy=1.4.1
- tensorboard=2.3.0
- tensorboard-plugin-wit=1.6.0
- viennarna=2.4.15
- pyopenssl=22.0.0
- certifi=2022.12.7
- ca-certificates=2023.01.10
channels:
- anaconda
- conda-forge
- bioconda
- defaults
- r
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- _tflow_select=2.3.0=eigen
- absl-py=0.11.0=py37h06a4308_0
- aiohttp=3.6.3=py37h7b6447c_0
- astunparse=1.6.3=py_0
- async-timeout=3.0.1=py37_0
- attrs=20.3.0=pyhd3eb1b0_0
- biopython=1.76=py37h516909a_0
- blinker=1.4=py37_0
- brotlipy=0.7.0=py37hb5d75c8_1001
- c-ares=1.17.1=h27cfd23_0
- ca-certificates=2020.12.5=ha878542_0
- cachetools=4.1.1=py_0
- certifi=2020.12.5=py37h89c1867_1
- cffi=1.14.4=py37hc58025e_1
- chardet=3.0.4=py37he5f6b98_1008
- click=7.1.2=py_0
- cryptography=3.1=py37hb09aad4_0
- cssselect2=0.2.1=pyh9f0ad1d_1
- curl=7.64.1=h33f0ec9_1
- cycler=0.10.0=py_2
- dbus=1.13.6=he372182_0
- decorator=4.4.2=py_0
- dill=0.3.3=pyhd8ed1ab_0
- expat=2.2.9=he1b5a44_2
- fontconfig=2.13.1=he4413a7_1000
- freetype=2.10.2=he06d7ca_0
- gast=0.3.3=py_0
- glib=2.65.0=h3eb4bd4_0
- google-auth=1.23.0=pyhd3eb1b0_0
- google-auth-oauthlib=0.4.2=pyhd3eb1b0_2
- google-pasta=0.2.0=py_0
- grpcio=1.31.0=py37hf8bcb03_0
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb31296c_0
- h5py=2.10.0=py37hd6299e0_1
- hdf5=1.10.6=hb1b8bf9_0
- hmmer=3.3=he1b5a44_1
- icu=58.2=hf484d3e_1000
- idna=2.10=pyh9f0ad1d_0
- importlib-metadata=2.0.0=py_1
- joblib=0.14.1=pyh9f0ad1d_0
- jpeg=9d=h516909a_0
- keras=2.4.3=0
- keras-base=2.4.3=py_0
- keras-preprocessing=1.1.0=py_1
- kiwisolver=1.2.0=py37h99015e2_0
- krb5=1.17.2=h926e7f8_0
- lcms2=2.11=hcbb858e_1
- ld_impl_linux-64=2.34=hc38a660_9
- libblas=3.8.0=17_openblas
- libcblas=3.8.0=17_openblas
- libcurl=7.64.1=hf7181ac_1
- libedit=3.1.20191231=he28a2e2_2
- libffi=3.3=he6710b0_2
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=9.3.0=h24d8f2e_15
- libgfortran-ng=7.5.0=hdf63c60_15
- libgomp=9.3.0=h24d8f2e_15
- libiconv=1.15=h516909a_1006
- liblapack=3.8.0=17_openblas
- libopenblas=0.3.10=pthreads_hb3c22a3_4
- libpng=1.6.37=hed695b0_2
- libprotobuf=3.13.0.1=hd408876_0
- libssh2=1.9.0=hab1572f_5
- libstdcxx-ng=9.3.0=hdf63c60_15
- libtiff=4.1.0=h4f3a223_6
- libuuid=2.32.1=h14c3975_1000
- libwebp-base=1.1.0=h36c2ea0_3
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.9=h13577e0_2
- libxslt=1.1.32=hae48121_1003
- lxml=4.4.1=py37h7ec2d77_0
- lz4-c=1.9.2=he1b5a44_3
- markdown=3.3.3=py37h06a4308_0
- matplotlib=3.1.3=py37_0
- matplotlib-base=3.1.3=py37hef1b27d_0
- multidict=4.7.6=py37h7b6447c_1
- ncurses=6.2=he1b5a44_1
- networkx=2.5=py_0
- numpy=1.18.1=py37h8960a57_1
- oauthlib=3.1.0=py_0
- olefile=0.46=pyh9f0ad1d_1
- openssl=1.1.1i=h7f98852_0
- opt_einsum=3.1.0=py_0
- pandas=1.0.3=py37h0da4684_1
- pcre=8.44=he1b5a44_0
- perl=5.26.2=h14c3975_0
- perl-bioperl=1.6.924=4
- perl-biox-seq=0.006007=pl526_1
- perl-compress-bgzf=0.005=pl526_0
- perl-file-which=1.23=pl526_0
- perl-threaded=5.26.0=0
- perl-yaml=1.29=pl526_0
- pillow=8.0.1=py37h718be6c_0
- pip=20.2.2=py_0
- prodigal=2.6.3=h516909a_2
- protobuf=3.13.0.1=py37he6710b0_1
- pthread-stubs=0.4=h14c3975_1001
- pyasn1=0.4.8=py_0
- pyasn1-modules=0.2.8=py_0
- pycparser=2.20=pyh9f0ad1d_2
- pyjwt=1.7.1=py37_0
- pyopenssl=19.1.0=py_1
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyqt=5.9.2=py37hcca6a23_4
- pysocks=1.7.1=py37he5f6b98_2
- python=3.7.7=hcff3b4d_5
- python-dateutil=2.8.1=py_0
- python_abi=3.7=1_cp37m
- pytz=2020.1=pyh9f0ad1d_0
- pyyaml=5.3.1=py37h7b6447c_1
- qt=5.9.7=h5867ecd_1
- readline=8.0=he28a2e2_2
- regex=2019.03.09=py37h14c3975_0
- reportlab=3.5.55=py37hd704e64_0
- requests=2.25.0=pyhd3deb0d_0
- requests-oauthlib=1.3.0=py_0
- rsa=4.6=py_0
- scikit-learn=0.22.1=py37hcdab131_1
- scipy=1.4.1=py37ha3d9a3c_3
- setuptools=49.6.0=py37hc8dfbb8_0
- sip=4.19.8=py37hf484d3e_1000
- six=1.15.0=pyh9f0ad1d_0
- sqlite=3.32.3=h4cf870e_1
- svglib=1.0.1=py37hc8dfbb8_1
- tensorboard=2.3.0=pyh4dce500_0
- tensorboard-plugin-wit=1.6.0=py_0
- tensorflow=2.3.0=eigen_py37h189e6a2_0
- tensorflow-base=2.3.0=eigen_py37h3b305d7_0
- tensorflow-estimator=2.3.0=pyheb71bc4_0
- termcolor=1.1.0=py37_1
- tinycss2=1.0.2=py_1
- tk=8.6.10=hed695b0_0
- tornado=6.0.4=py37h8f50634_1
- urllib3=1.25.11=py_0
- viennarna=2.4.15=py37h13b99d1_0
- webencodings=0.5.1=py_1
- werkzeug=1.0.1=py_0
- wheel=0.35.1=pyh9f0ad1d_0
- wrapt=1.12.1=py37h7b6447c_1
- xmltodict=0.12.0=py_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xz=5.2.5=h516909a_1
- yaml=0.2.5=h7b6447c_0
- yarl=1.6.2=py37h7b6447c_0
- zipp=3.4.0=pyhd3eb1b0_0
- zlib=1.2.11=h516909a_1007
- zstd=1.4.5=h6597ccf_2