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Feature/adaptyv bio (#104)
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Co-authored-by: Timur Ishmuratov <ishmuratov7timur7@gmail.com>
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JaktensTid and timurishmuratov7 authored Nov 25, 2024
1 parent d9335d5 commit 2507dcd
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3 changes: 2 additions & 1 deletion .dockerignore
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Expand Up @@ -5,5 +5,6 @@ build/Dockerfile
.github
.git
**/.git
**/.env**
.env
nolabs/infrastructure/.env

14 changes: 13 additions & 1 deletion README.md
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Expand Up @@ -225,7 +225,19 @@ Model: [Proteinmpnn](https://github.com/dauparas/ProteinMPNN)
docker compose up proteinmpnn
```

### 6) Biobuddy
### 6) Adaptyv bio Protein Affinity Characterization component

Uses [adaptyv bio](https://www.adaptyvbio.com/) api

To enable real data flow to adaptyv bio change `ENVIRONMENT` environment variable in `nolabs/infrastructure/.env` to `production`

### 7) Adaptyv bio Protein Binding Screening component

Uses [adaptyv-bio](https://www.adaptyvbio.com/) api

To enable real data flow to adaptyv bio change `ENVIRONMENT` environment variable in `nolabs/infrastructure/.env` to `production`

### 8) Biobuddy

To enable biobuddy:

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4 changes: 2 additions & 2 deletions docker-compose.yaml
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Expand Up @@ -120,7 +120,7 @@ services:
capabilities: [ gpu ]

nolabs-backend:
image: 'ghcr.io/basedlabs/nolabs-backend:1.0.0'
image: 'ghcr.io/basedlabs/nolabs-backend:1.1.0'
network_mode: host
working_dir: /app
build:
Expand All @@ -138,7 +138,7 @@ services:
command: python nolabs/workflow/worker.py

nolabs-frontend:
image: 'ghcr.io/basedlabs/nolabs-frontend:1.0.0'
image: 'ghcr.io/basedlabs/nolabs-frontend:1.1.0'
network_mode: host
working_dir: /app
build:
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