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ENH Update drug categorization logic #386

ENH Update drug categorization logic

ENH Update drug categorization logic #386

Workflow file for this run

name: Test argNorm
on:
- push
- pull_request
jobs:
build:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version:
- "3.7"
- "3.8"
- "3.9"
- "3.10"
- "3.11"
- "3.12"
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install flake8 pytest
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
python -m pip install .
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest
run: |
python -m pytest tests/
- name: Test with argNorm command
run: |
for t in integration_tests/*.py; do
echo "Running $t ..."
python $t
done