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ENH Update drug categorization logic #54

Merged
merged 2 commits into from
Jun 24, 2024
Merged

ENH Update drug categorization logic #54

merged 2 commits into from
Jun 24, 2024

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Vedanth-Ramji
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  • Always return immediate child of 'antibiotic molecule' for drug categorization
  • Antibiotic mixture ARO mapping is excluded for all cases. Return constituent drug classes instead
  • Use 'has_part' relationship to handle antibiotic mixtures and give drug class rather than 'antibiotic mixture'

@Vedanth-Ramji
ENH Update drug categorization logic
5f9f32b 
- Always return immediate child of 'antibiotic molecule' for drug categorization
- Antibiotic mixture ARO mapping is excluded for all cases. Return constituent drug classes instead
- Use 'has_part' relationship to handle antibiotic mixtures and give drug class rather than 'antibiotic mixture'
luispedro
luispedro requested changes Jun 23, 2024
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tests/test_arg_category.py Outdated Show resolved Hide resolved
@luispedro luispedro merged commit 3394a82 into BigDataBiology:main Jun 24, 2024
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@Vedanth-Ramji Vedanth-Ramji deleted the update_drug_categorization branch July 27, 2024 05:26
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@Vedanth-Ramji @luispedro