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The Blue Brain Project

Open Source Software produced and used by the Blue Brain Project
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  1. HighFive HighFive Public

    HighFive - Header-only C++ HDF5 interface

    C++ 674 160

  2. Brayns Brayns Public

    Visualizer for large-scale and interactive ray-tracing of neurons

    C++ 288 45

  3. nexus nexus Public

    Blue Brain Nexus - A knowledge graph for data-driven science

    Scala 277 74

  4. BluePyOpt BluePyOpt Public

    Blue Brain Python Optimisation Library

    Python 198 96

  5. CoreNeuron CoreNeuron Public archive

    Simulator optimized for large scale neural network simulations.

    C++ 135 38

  6. NeuroMorphoVis NeuroMorphoVis Public

    A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.

    Python 126 26

Repositories

Showing 10 of 264 repositories
  • libsonata Public

    A python and C++ interface to the SONATA format

    BlueBrain/libsonata’s past year of commit activity
    C++ 11 LGPL-3.0 12 24 (1 issue needs help) 1 Updated Sep 19, 2024
  • nmodl Public

    Code Generation Framework For NEURON MODeling Language

    BlueBrain/nmodl’s past year of commit activity
    C++ 52 Apache-2.0 15 159 (12 issues need help) 24 Updated Sep 19, 2024
  • nmodl-references Public

    nmodl references

    BlueBrain/nmodl-references’s past year of commit activity
    C++ 0 Apache-2.0 0 0 1 Updated Sep 19, 2024
  • BluePyEModel Public

    Blue Brain Python Electrical Modeling Pipeline

    BlueBrain/BluePyEModel’s past year of commit activity
    Python 4 5 0 1 Updated Sep 19, 2024
  • neurodamus Public

    A BBP Simulation Control application for NEURON

    BlueBrain/neurodamus’s past year of commit activity
    Python 8 Apache-2.0 7 6 6 Updated Sep 19, 2024
  • MultiscaleRun Public

    Python package to run brain cells simulation at different scales

    BlueBrain/MultiscaleRun’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 1 Updated Sep 19, 2024
  • bbp-data-push Public

    CLIs that take in input Atlas Pipeline datasets and push them into Nexus along with a Resource properties payload

    BlueBrain/bbp-data-push’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Sep 19, 2024
  • emodel-generalisation Public

    Generalisation of electrical models of neurons with MCMC

    BlueBrain/emodel-generalisation’s past year of commit activity
    Python 3 3 2 2 Updated Sep 19, 2024
  • scholarag Public

    Scientific literature RAG

    BlueBrain/scholarag’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Sep 19, 2024
  • neuroagent Public

    LLM agent made to communicate with different neuroscience related tools

    BlueBrain/neuroagent’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Sep 19, 2024
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