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  1. cMD cMD Public

    Scripts to run conventional MD simulations in AMBER (PLUMED link)

    Shell 4

  2. tutorial-MD tutorial-MD Public

    Tutorial MD simulations

    Jupyter Notebook

  3. biocatcodeexpander-2024 biocatcodeexpander-2024 Public

    Here is where you can find all the inputs for the MD simulations tutorial

    Jupyter Notebook