more edits to readme

CCBR · Jul 6, 2021 · 908f59e · 908f59e
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 ## Resources
 
 This folder, `resources/`, is meant to contain all resources (except larger genome indexes) necessary for running the workflow. The subfolders are:
-* blacklistFa: Blacklist BED files are downloaded for human (v3) and mouse (v1). Using the coordinates from these BED files, fasta sequences are extracted for hg19/39 and mm10.
-* frip: BED files for DHS/enhancer/promoter locations for hg19/39 and mm10 genomes.
-* motif: HOCOMOCO v11 motifs in HOMER and MEME formats for human and mouse.
-* tssBed: BED files pin-pointing the transcription start sites of annotated genes for hg19/38 and mm10.
+* **blacklistFa**: Blacklist BED files are downloaded for human (v3) and mouse (v1). Using the coordinates from these BED files, fasta sequences are extracted for hg19/39 and mm10.
+* **frip**: BED files for DHS/enhancer/promoter locations for hg19/39 and mm10 genomes.
+* **motif**: HOCOMOCO v11 motifs in HOMER and MEME formats for human and mouse.
+* **tssBed**: BED files pin-pointing the transcription start sites of annotated genes for hg19/38 and mm10.
 
 
 `cluster.json` file can make specific resource requests to biowulf via slurm. Each Snakemake rule can make a unique hardware request for slurm execution.