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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 14

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    32 39

Repositories

Showing 10 of 404 repositories
  • prime-reportstream Public

    ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

    CDCgov/prime-reportstream’s past year of commit activity
    Kotlin 73 CC0-1.0 40 1,360 111 Updated Nov 10, 2024
  • phoenix Public

    🔥🐦🔥PHoeNIx: A short-read pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 57 Apache-2.0 19 9 2 Updated Nov 10, 2024
  • eMKF Public
    CDCgov/eMKF’s past year of commit activity
    SAS 2 Apache-2.0 1 0 0 Updated Nov 9, 2024
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 6 2 0 0 Updated Nov 9, 2024
  • reportstream-sftp-ingestion Public
    CDCgov/reportstream-sftp-ingestion’s past year of commit activity
    Go 5 Apache-2.0 0 0 1 Updated Nov 9, 2024
  • RecordLinker Public

    The RecordLinker is a service that links records from two datasets based on a set of common attributes. The service is designed to be used in a variety of public health contexts, such as linking patient records from different sources or linking records from different public health surveillance systems.

    CDCgov/RecordLinker’s past year of commit activity
    Python 2 Apache-2.0 0 11 4 Updated Nov 9, 2024
  • data-exchange-csv Public

    For Data Exchange in csv format

    CDCgov/data-exchange-csv’s past year of commit activity
    Go 2 Apache-2.0 2 0 0 Updated Nov 9, 2024
  • trusted-intermediary Public

    Bringing together healthcare providers by reducing the connection burden.

    CDCgov/trusted-intermediary’s past year of commit activity
    Groovy 11 Apache-2.0 5 187 3 Updated Nov 9, 2024
  • ReportVision Public

    Intelligent Data Workflow Automation

    CDCgov/ReportVision’s past year of commit activity
    TypeScript 1 Apache-2.0 2 53 5 Updated Nov 9, 2024
  • pyrenew-hew Public

    Models and infrastructure for forecasting COVID-19 and Flu hospitalizations using wastewater data with PyRenew

    CDCgov/pyrenew-hew’s past year of commit activity
    Python 3 Apache-2.0 0 44 4 Updated Nov 8, 2024
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