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18 Open 96 Closed
18 Open 96 Closed
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Issues list

[Internal] [Feature] Fix tests (for Github Actions) enhancement New feature or request
#220 opened Nov 14, 2024 by jessicarowell v4.1.0
@jessicarowell
[Internal] [Feature] Incorporate AST and other optional bacteria BioSample attributes to submission.xml enhancement New feature or request
#219 opened Nov 14, 2024 by jessicarowell
1 task done
v4.1.0
@jessicarowell
[Internal] [Bug] Table2asn error on test data user-provided annotations: duplicate Bioseq id bug Something isn't working
#217 opened Nov 13, 2024 by jessicarowell
1 task done
v4.1.0
[Internal] [Bug] Conda environment on scicomp: RepeatMasker::createLib(): Error bug Something isn't working
#216 opened Nov 12, 2024 by jessicarowell
1 task done
v4.1.0
@jessicarowell
[Internal] [Feature] Refactor to bulk-submit samples enhancement New feature or request
#213 opened Nov 8, 2024 by jessicarowell v4.1.0
@jessicarowell
[Internal] [Bug] Implement logging after the batch submission code is written bug Something isn't working
#212 opened Nov 7, 2024 by jessicarowell
1 task done
v4.0.0
@jessicarowell
[Internal] [Feature] Write a new update_submission.py script enhancement New feature or request
#211 opened Nov 7, 2024 by jessicarowell
1 task done
v4.0.0
@jessicarowell
[Internal] [Bug] Nextflow version 24.04.2 and nextflow.config tower configuration incompatibility bug Something isn't working
#210 opened Nov 7, 2024 by jessicarowell
1 task done
@jessicarowell
[Internal] [Feature] Cloud support for submissions enhancement New feature or request
#204 opened Oct 4, 2024 by jessicarowell
1 task done
v4.1.0
@jessicarowell
[External] [Bug] CWE-798 Security Vulnerability - Plain Text Password bug Something isn't working
#202 opened Oct 1, 2024 by thomasphung
1 task done
[External] [Bug] test fails at validation step bug Something isn't working
#201 opened Aug 1, 2024 by ammaraziz
1 task done
[Internal] [Feature] Make these custom field validations "smarter" enhancement New feature or request
#198 opened Apr 11, 2024 by jessicarowell
1 task done
@jessicarowell
[Internal] [Feature] Accommodate additional biosample metadata templates starting with wastewater enhancement New feature or request
#189 opened Mar 20, 2024 by kyleoconnell
[Internal] [Bug] Won't accept any 'dots' in sample file names bug Something isn't working
#173 opened Feb 28, 2024 by jessicarowell
1 task done
@jessicarowell
[Internal] [Feature] Refactor to support nanopore data enhancement New feature or request
#172 opened Feb 28, 2024 by jessicarowell
1 task done
@jessicarowell
[Internal] [Feature] Migrate to nf-core params validation enhancement New feature or request
#143 opened Jan 31, 2024 by kyleoconnell
1 task done
[Internal] [Test] Add Separate CI For Dev Branch implement testing
#89 opened Dec 6, 2023 by ankushkgupta2
1 task done
@ankushkgupta2
1
[Internal] [Feature] Add Singularity to C/I enhancement New feature or request testing
#56 opened Jun 22, 2023 by ankushkgupta2
1 task done
@ankushkgupta2
ProTip! Updated in the last three days: updated:>2024-11-13.