DESCRIPTION

Package: TopArtCalc
Type: Package
Title: Package for Calculation of TOP-ART Score for WGS/WES Sample
Version: 1.2.2
Date: 2024-05-21
Authors@R: c(
  person("Marco", "Rheinnecker", 
    email="marco.rheinnecker@dkfz-heidelberg.de", 
    role = c("aut", "cre"),
    comment=c(ORCID="0009-0009-7181-3977")), 
  person("Marc", "Ruebsam", 
    role = c("aut")),
  person("Daniel", "Huebschmann", 
    role = c("aut")),  
  person("Martina", "Froehlich", 
    role = c("aut")),
  person("Barbara", "Hutter", 
    role = c("aut"))
    )
Imports: 
    knitr,
    GenomicRanges, 
    IRanges, 
    ZygosityPredictor, 
    dplyr, 
    stringr, 
    stringi,
    purrr,
    tidyr,
    utils
License: MIT + file LICENSE
Description: The TOP-ART calculator calculates the TOP-ART score. A score to assess the level of homologous recombination deficiency (HRD) in bulk NGS data of tumor with matched normal control.
RoxygenNote: 7.3.1
Encoding: UTF-8
biocViews: BiomedicalInformatics
Depends: 
    R (>= 4.3.0)
LazyData: false