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Installing MhcVizPipe
kevinkovalchik edited this page Sep 3, 2021
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Before proceeding, be sure you have installed Python 3.7 or higher and all the required third-party software. If you have not done this, see the respective wiki pages:
- Installing Python
- Downloading third-party software
- Installing third-party software
These instructions show you how to install MhcVizPipe in your base Python environment. If you are familiar with virtual environments, we recommend you use one to avoid conflicts with other packages you might have installed.
- Open a terminal
- In Linux use the keyboard shortcut
ctrl-alt-t
to do so. - On a Mac search for "terminal" in the Spotlight search and open it.
- In Linux use the keyboard shortcut
- Type or copy-paste the following into the terminal and hit enter:
pip3 install MhcVizPipe
It might chug for a bit. When it is done, you should have a working installation of MhcVizPipe.
- NOTE: if you encounter an error about permission like:
Try using one of the following commands:
ERROR: Could not install packages due to an EnvironmentError: [Errno 13] Permission denied:
ORpip3 install --user MhcVizPipe
The first option installs MhcVizPipe only for your user. In the second, you give pip elevated privileges to carry out the installation. This can only be done if you have sudo privileges.sudo pip3 install MhcVizPipe
Now you are ready to run MVP for the first time.