This repository has been archived by the owner on Feb 6, 2024. It is now read-only.
Beta version 1.6.6.b
Pre-release
Pre-release
NOTE: Do not use this beta version unless you are asked to test it.
Bugfixes:
- Memory leak in reading NEXUS alignment (possibly fix --runs option reported by David Maddison).
- Crash with resampling strategy (
-bsam
) for standard bootstrap (-b
) and jackknife (-j
option). - Standard bootstrap with partition merging (
-m ...MERGE
) (reported by Guoqing Li). - Wrong error with codon models and
-t RANDOM
(reported by Karen Meusemann). - Parsing error with blank chars in partition file (reported by David Maddison).
Bugfixes from v1.6.6.a:
- Issue with internal tree node names changed from slash to underscore (reported by JP Flandrois).
- ASSERT with protein mixture models (reported by Giddy Landan).
- Disallow specifying both --runs with -lmap option (reported by Giap Nguyen)
- Reading nexus composite characters for non-DNA data (reported by a web user)
- Support amino-acid O (22nd amino-acid), which is regarded as missing data (reported by Cuong).
- Initialising free-rate model, which may create negative rates in rare cases (reported by Paul Frandsen).