This repository has been archived by the owner on Feb 6, 2024. It is now read-only.
Beta version 1.7-beta3
Pre-release
Pre-release
- New option
--model-joint MODEL
to enforce joint model name for all partitions while rate heterogeneity is still unlinked. - Update Terraphast library (thanks Lukasz).
- Proper parsimony branch lengths by ancestral reconstruction.
-bl-eval
default to 1 (instead of 2) thanks to better parsimony branch lengths.- Faster and SIMD kernel for Sankoff parsimony.
- Much faster parsimony with constraint tree.
- Parallel computation of parsimony trees.
Bugfixes:
- Crash with consensus construction for rooted trees.