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Workflow template to dereplicate and cherry-pick mass spectrometry spectraAn interactive interface to run reproducible workflow to dereplicate and cherry-pick mass spectrometry spectra with the 'maldipickr' package.

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ClavelLab/maldipickrGUI

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maldipickrGUI

Lifecycle: experimental

The goal of {maldipickrGUI} is to provide an interactive interface to run reproducible workflow to dereplicate and cherry-pick mass spectrometry spectra using the {maldipickr}, in order to reduce the redundancy of bacterial isolates.

The interface is a {shiny} application, built using the robust {golem} framework. Reproducible workflows are created using {targets}.

Installation

You can install the development version of {maldipickrGUI} using the following command in R:

remotes::install_github("ClavelLab/maldipickrGUI")

Code of Conduct

Please note that the {maldipickrGUI} project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.

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Workflow template to dereplicate and cherry-pick mass spectrometry spectraAn interactive interface to run reproducible workflow to dereplicate and cherry-pick mass spectrometry spectra with the 'maldipickr' package.

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