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1. methrix methrix Public

   An R 📦 for fast and flexible DNA methylation analysis

   R 31 12

2. figeno figeno Public

   Tool for plotting sequencing data along genomic coordinates.

   Python 252 8

3. ChIPseq_workflows ChIPseq_workflows Public

   Workflows for processing of ChIP-seq, ChIPmentation, and Cut&Run data based on the Common Workflow Language

   Common Workflow Language 9 2

4. ATACseq_workflows ATACseq_workflows Public

   Workflows for processing of ATAC-seq Data based on the Common Workflow Language (CWL)

   Common Workflow Language 4

5. WGBS_workflows WGBS_workflows Public

   WGBS pipeline based on CWL

   Common Workflow Language 2 1

6. methylbert methylbert Public

   A Transformer-based model for read-level DNA methylation pattern identification and tumour deconvolution

   Jupyter Notebook 21 3