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TransMapPsl failed #303

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DhakadPankaj opened this issue Oct 16, 2023 · 0 comments
Open

TransMapPsl failed #303

DhakadPankaj opened this issue Oct 16, 2023 · 0 comments

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@DhakadPankaj
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Hi, I'm getting this error. Is there a solution to this problem? I have seen in the "cat/init.py" script that similar problem is encountered in test data as well. Thanks!

WARNING: 2023-10-15 13:48:51,720 - Part of transMap command failed, running again...
WARNING: 2023-10-15 13:48:54,127 - Part of transMap command failed, running again...
ERROR: 2023-10-15 13:48:54,186 - [pid 21081] Worker Worker(salt=799114345, workers=45, host=c1, username=pdhakad, pid=53710) failed Task: TransMapPsl for DROSOPHILA_MACROSPINA
Traceback (most recent call last):
File "/ceph/users/pdhakad/tools/Comparative-Annotation-Toolkit/cat/init.py", line 1370, in run
tools.procOps.run_proc(cmd, stdout=tmp_fh, stderr='/dev/null')
File "/ceph/users/pdhakad/tools/Comparative-Annotation-Toolkit/tools/procOps.py", line 73, in run_proc
pl.wait()
File "/ceph/users/pdhakad/tools/Comparative-Annotation-Toolkit/tools/pipeline.py", line 1127, in wait
self.raiseIfExcept()
File "/ceph/users/pdhakad/tools/Comparative-Annotation-Toolkit/tools/pipeline.py", line 1085, in raiseIfExcept
p.raiseIfExcept()
File "/ceph/users/pdhakad/tools/Comparative-Annotation-Toolkit/tools/pipeline.py", line 749, in raiseIfExcept
raise self.exceptInfo[0].with_traceback(self.exceptInfo[2])
tools.pipeline.ProcException: process exited 255: pslMapPostChain "<luigi.local_target.LocalTarget object at 0x145b9db3b550>" /dev/stdout

During handling of the above exception, another exception occurred:

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