diff --git a/example/UHR_chr22_short_reads.fofn b/example/UHR_chr22_short_reads.fofn index abcb371..2d082b9 100755 --- a/example/UHR_chr22_short_reads.fofn +++ b/example/UHR_chr22_short_reads.fofn @@ -1,2 +1,2 @@ -/full/path/example/UHR_Rep1_chr22.R1.fastq.gz /full/path/example/UHR_Rep1_chr22.R2.fastq.gz -/full/path/example/UHR_Rep2_chr22.R1.fastq.gz /full/path/example/UHR_Rep2_chr22.R2.fastq.gz +example/UHR_Rep1_chr22.R1.fastq.gz example/UHR_Rep1_chr22.R2.fastq.gz +example/UHR_Rep2_chr22.R1.fastq.gz example/UHR_Rep2_chr22.R2.fastq.gz diff --git a/utilities/report_qc/SQANTI3_report.Rmd b/utilities/report_qc/SQANTI3_report.Rmd index 22da0b8..569186b 100755 --- a/utilities/report_qc/SQANTI3_report.Rmd +++ b/utilities/report_qc/SQANTI3_report.Rmd @@ -159,7 +159,7 @@ nIso = nrow(data.class) How to use the report? -
+