Toolset for Production and an Analysis of Antigen Microarrays
The easiest way to run the shiny based web application is through R as shown below. Alternatively the files be downloaded and run locally or uploaded to a shiny server as described at http://shiny.rstudio.com/.
# 1. If not installed first install the following packages.
install.packages("shiny")
install.packages("shinydashboard")
install.packages("tidyverse")
install.packages("readxl")
install.packages("janitor")
install.packages("cobs",dependencies=TRUE, repos="https://cran.rstudio.com/")
install.packages("SuperCurve", repos="http://R-Forge.R-project.org")
# 2. Load Shiny.
library(shiny)
# 3. Run the application from GitHub.
runGitHub("AntigenMicroarray", "JosephLongworth")
# 4. Testing.
A zip file above can be downloaded above with data required to process a single antigen array.
Antigen Names
Print Design
Several Scan Data files (multiple Gains)
# Dulce editing