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index.html
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<!DOCTYPE html>
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
<meta
name="viewport"
content="width=device-width, initial-scale=1, maximum-scale=1.0, user-scalable=no"
/>
<title>A farewell to Caffeine</title>
<link rel="shortcut icon" type="image/x-icon" href="/favicon.ico?" />
<!-- CSS -->
<link
href="https://fonts.googleapis.com/icon?family=Material+Icons"
rel="stylesheet"
/>
<!-- Compiled and minified CSS -->
<link
rel="stylesheet"
href="https://cdnjs.cloudflare.com/ajax/libs/materialize/1.0.0/css/materialize.min.css"
/>
<link
href="css/style.css"
type="text/css"
rel="stylesheet"
media="screen,projection"
/>
<!-- Compiled and minified JavaScript -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/materialize/1.0.0/js/materialize.min.js"></script>
</head>
<body>
<!-- Dropdown Structure -->
<div class="navbar-fixed">
<nav role="navigation">
<div class="nav-wrapper container">
<a id="logo-container" href="/" class="brand-logo">
<span class="align-right"
><img
src="https://dd-decaf.eu/images/decaf-logo-md.svg"
height="60"
alt=""
style="float: left"
/></span>
<span style="float: left">A farewell to Caffeine</span>
</a>
</div>
</nav>
</div>
<div class="container">
<p>Dear visitor,</p>
<p>
Are you looking for Caffeine, the SaaS platform for data- and
model-driven strain engineering? Unfortunately, Caffeine reached its end
of life around August 2023 😭. Below, you can find a screen recording of
some of the strain design and data integration capabilities that
Caffeine featured.
</p>
<iframe
width="560"
height="315"
src="https://www.youtube.com/embed/5_h_rWcoTe8?si=8DlU6IaBpcKTfQ6W"
title="YouTube video player"
frameborder="0"
allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share"
referrerpolicy="strict-origin-when-cross-origin"
allowfullscreen
></iframe>
<p>
After the funding from the European Union (Horizon 2020) ended in 2019
(which financed its development and deployment from 2016 to 2019 as part
of the
<a href="https://dd-decaf.eu/">DD-DeCaF project</a>) and parts of the
development team moved on to co-founding a
<a href="https://unseen.bio/"
>startup in the gut microbiome health area</a
>, I kept the lights on for a few more years (which had been easy due to
the great job the development team had done on the platform) with the
<a href="https://www.biosustain.dtu.dk/"
>Novo Nordisk Foundation Center for Biosustainability</a
>
kindly covering the hosting costs. It served about 75 unique monthly
users.
</p>
<p>
Around August 2023, Google Cloud unfortunately deprecated some APIs that
would have required some more serious work on the source code. At the
time, I did not have the capacity to tackle the required changes myself.
So, I had to take the platform down.
</p>
<p>
If you like what you see in the video, all
<a href="https://github.com/dd-decaf">source code</a> is open source and
licensed permissively using the Apache License Version 2.0. Feel free to
contact me if you'd be interested in resurrecting the platform, I'd be
happy to provide pointers. This
<a href="https://github.com/DD-DeCaF/caffeine-bootstrap">repository</a>
would be a good starting point as it provides the means for deploying
the platform locally (it suffers from a number of dependency issues
though that need to be resolved).
</p>
<p>Sincerest apologies for any inconvenience caused,</p>
<p>Niko (the last custodian of Caffeine)</p>
<p>
<a href="mailto:niko.sonnenschein@gmail.com"
>niko.sonnenschein@gmail.com</a
>
</p>
</div>
</body>
</html>