Rough schedule, we will cover as much as we can and leave the rest as homework.
- 25 min Pathway prediction
- Predict pathways for a given compound
- 35 min Generating gene knockout strategies
- What's in the model, reactions, metabolites, genes
- Expressions and objectives
- Simulating using FBA, changing the objective
- 30 min Get suggestions for expression modulation targets
- Flux scanning based on enforces objective flux
- Differential FVA