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(getpedgenos) all.filter.ped bad geno * #101

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zishanw opened this issue Mar 14, 2024 · 1 comment

zishanw commented Mar 14, 2024

Hi there,

I got the error below after running convertf -p transfer.conf

Here is my parameter file

my .ped file looks like

The text was updated successfully, but these errors were encountered:

bumblenick commented Mar 14, 2024 via email

I strongly suspect you have an allele "*" in your ped file. Please grep for this. Nick

On Wed, Mar 13, 2024 at 8:52 PM Shan ***@***.***> wrote: Hi there, I got the error below after running convertf -p transfer.conf image.png (view on web) <https://github.com/DReichLab/EIG/assets/89725090/1f5e237e-0a39-4541-9165-9857248665a0> Here is my parameter file image.png (view on web) <https://github.com/DReichLab/EIG/assets/89725090/fdfa7887-23a2-480f-a9db-91ff75ba80a9> my .ped file looks like image.png (view on web) <https://github.com/DReichLab/EIG/assets/89725090/d6b8b9f1-f4e8-4e34-8c61-d9f177d8da2d> — Reply to this email directly, view it on GitHub <#101>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AEE77B6LNBAQRFWPNUBT7LLYYDYFJAVCNFSM6AAAAABEVFAF7SVHI2DSMVQWIX3LMV43ASLTON2WKOZSGE4DKMJXGAZDCNI> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

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