use different docker-compose files for different purposes

DeepRank · Aug 5, 2021 · 0ed01f5 · 0ed01f5
1 parent a4cdf2d
commit 0ed01f5
Show file tree

Hide file tree

Showing 3 changed files with 28 additions and 12 deletions.
diff --git a/docker-compose-learn.yml b/docker-compose-learn.yml
@@ -0,0 +1,11 @@
+version: "3"
+services:
+  deeprank:
+    build:
+      context: .
+      dockerfile: Dockerfile
+    volumes:
+      - "/home/cbaakman/deeprank-runs:/runs"
+      - "/home/cbaakman/variants-grid.hdf5:/data/variants.hdf5:ro"
+    working_dir: /runs/run1
+    command: python /usr/src/app/scripts/learn.py /data/variants.hdf5
diff --git a/docker-compose-preprocess.yml b/docker-compose-preprocess.yml
@@ -0,0 +1,17 @@
+version: "3"
+services:
+  deeprank:
+    build:
+      context: .
+      dockerfile: Dockerfile
+    volumes:
+      - "/home/cbaakman/deeprank-runs:/runs"
+      - "/home/cbaakman/deeprank-datasets:/datasets"
+      - "/home/cbaakman/pdb:/pdb"
+      - "/home/cbaakman/pssm-gen:/pssm-gen"
+    working_dir: /runs/run-mp
+    environment:
+        - MASTER_ADDR=0.0.0.0
+        - MASTER_PORT=1088
+        - RANK=0
+        - WORLD_SIZE=1
diff --git a/docker-compose.yml b/docker-compose.yml