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DendrouLab · Apr 24, 2024 · 283af27 · 283af27
1 parent 8112fb2
commit 283af27
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/.github/workflows/refmap-ci.yml b/.github/workflows/refmap-ci.yml
@@ -82,8 +82,8 @@ jobs:
         run: |
           cd reference_mapping
           sed -i 's+/Users/fabiola.curion/Documents/devel/miniconda3/envs/pipeline_env+pipeline_env+g' pipeline.yml
-          sed -i 's+/Users/fabiola.curion/Documents/devel/data_test.dir/data_for_scvi_test/pancreas_model/model.pt+reference_mapping/models/pancreas_model/model.pt+g' pipeline.yml
-          sed -i 's+/Users/fabiola.curion/Documents/devel/data_test.dir/data_for_scvi_test/pancreas_model_scanvi/model.pt+reference_mapping/models/pancreas_model_scanvi/model.pt+g' pipeline.yml
+          sed -i 's+/Users/fabiola.curion/Documents/devel/data_test.dir/data_for_scvi_test/pancreas_model/model.pt+models/pancreas_model/model.pt+g' pipeline.yml
+          sed -i 's+/Users/fabiola.curion/Documents/devel/data_test.dir/data_for_scvi_test/pancreas_model_scanvi/model.pt+models/pancreas_model_scanvi/model.pt+g' pipeline.yml
           sed -i 's+max_epochs: 200+max_epochs: 20+g' pipeline.yml
   
       - name: File tree