diff --git a/.github/workflows/refmap-ci.yml b/.github/workflows/refmap-ci.yml index b9d1767b..a54d700f 100644 --- a/.github/workflows/refmap-ci.yml +++ b/.github/workflows/refmap-ci.yml @@ -84,7 +84,7 @@ jobs: sed -i 's+/Users/fabiola.curion/Documents/devel/miniconda3/envs/pipeline_env+pipeline_env+g' pipeline.yml sed -i 's+/Users/fabiola.curion/Documents/devel/data_test.dir/data_for_scvi_test/pancreas_model/model.pt+reference_mapping/models/pancreas_model/model.pt+g' pipeline.yml sed -i 's+/Users/fabiola.curion/Documents/devel/data_test.dir/data_for_scvi_test/pancreas_model_scanvi/model.pt+reference_mapping/models/pancreas_model_scanvi/model.pt+g' pipeline.yml - sed -i 's+max_epochs: 200+max_epochs: 20' pipeline.yml + sed -i 's+max_epochs: 200+max_epochs: 20+g' pipeline.yml - name: File tree if: env.debug == 'true'