Skip to content

Commit

Permalink
Update integration.md
Browse files Browse the repository at this point in the history
  • Loading branch information
giuliaelgarcia authored Mar 5, 2024
1 parent 031c824 commit be3cc40
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion docs/workflows/integration.md
Original file line number Diff line number Diff line change
Expand Up @@ -25,4 +25,4 @@ The ideal way to run `panpipes integration` is to use the output `MuData` file f
The MuData object required should contain normalised data in the X slot of each modality, a 'raw_counts' layer in each modality, and a sample_id column in each slot of the obs and the outer obs. A plus is a PCA in the obsm slot for each modality, if not it will be calculated on the flight with default parameters.

## Algorithms supported by panpipes for uni and multimodal integration
Please check [Integration methods implemented in panpipes](https://github.com/DendrouLab/panpipes/blob/docs_g/docs/usage/integration_methods.md) for a description of the algorithms used in the integration step.
Please check [Integration methods implemented in panpipes](https://github.com/DendrouLab/panpipes/blob/docs_g/docs/usage/integration_methods.md) for a description of the algorithms and source references for the methods used in the integration step.

0 comments on commit be3cc40

Please sign in to comment.