From be3cc407634bc057c3e46f14768140688d367356 Mon Sep 17 00:00:00 2001 From: giuliaelgarcia <147185635+giuliaelgarcia@users.noreply.github.com> Date: Tue, 5 Mar 2024 11:14:49 +0000 Subject: [PATCH] Update integration.md --- docs/workflows/integration.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/workflows/integration.md b/docs/workflows/integration.md index ec09341c..c690cc68 100644 --- a/docs/workflows/integration.md +++ b/docs/workflows/integration.md @@ -25,4 +25,4 @@ The ideal way to run `panpipes integration` is to use the output `MuData` file f The MuData object required should contain normalised data in the X slot of each modality, a 'raw_counts' layer in each modality, and a sample_id column in each slot of the obs and the outer obs. A plus is a PCA in the obsm slot for each modality, if not it will be calculated on the flight with default parameters. ## Algorithms supported by panpipes for uni and multimodal integration - Please check [Integration methods implemented in panpipes](https://github.com/DendrouLab/panpipes/blob/docs_g/docs/usage/integration_methods.md) for a description of the algorithms used in the integration step. + Please check [Integration methods implemented in panpipes](https://github.com/DendrouLab/panpipes/blob/docs_g/docs/usage/integration_methods.md) for a description of the algorithms and source references for the methods used in the integration step.