increased chunk size for upper triangle matrix calc #85
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| name: Python Test and Coverage | |
| on: | |
| push: | |
| branches: | |
| - main | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 # without submodules | |
| - name: Disable the keychain credential helper | |
| run: git config --global credential.helper "" | |
| - name: Enable the local store credential helper | |
| run: git config --global --add credential.helper store | |
| - name: Add credential | |
| run: echo "https://x-access-token:${{ secrets.SUBMODULE_GITHUB_TOKEN }}@github.com" >> ~/.git-credentials | |
| - name: Tell git to use https instead of ssh whenever it encounters it | |
| run: 'git config --global url."https://github.com/".insteadof git@github.com:' | |
| - name: Git submodule initialization | |
| run: | | |
| git submodule update --init --recursive | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| # Semantic version range syntax or exact version of a Python version | |
| python-version: "3.9" | |
| # Optional - x64 or x86 architecture, defaults to x64 | |
| architecture: "x64" | |
| - name: Display Python version | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| if [ -f requirements.extras.txt ]; then pip install -r requirements.extras.txt; fi | |
| pip install pytest pytest-cov | |
| - name: Run pytest with coverage | |
| run: | | |
| python3 -m coverage run -m pytest tests --junitxml=report.xml --ignore=tests/integration_tests | |
| coverage report -i --include=src/* --omit="src/ssl_library/*" | |
| coverage xml -i --include=src/* --omit="src/ssl_library/*" | |
| codecov | |
| - name: Upload coverage reports to Codecov | |
| uses: codecov/codecov-action@v4 | |
| env: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| slug: Digital-Dermatology/SelfClean |