debugging workflow

Digital-Dermatology · Feb 14, 2024 · 063423d · 063423d
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commit 063423d
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Showing 2 changed files with 12 additions and 14 deletions.
diff --git a/.github/workflows/pytest-coverage.yml b/.github/workflows/pytest-coverage.yml
@@ -12,16 +12,16 @@ jobs:
         steps:
             - uses: actions/checkout@v4 # without submodules
 
-            - name: disable the keychain credential helper
+            - name: Disable the keychain credential helper
               run: git config --global credential.helper ""
 
-            - name: enable the local store credential helper
+            - name: Enable the local store credential helper
               run: git config --global --add credential.helper store
 
-            - name: add credential
+            - name: Add credential
               run: echo "https://x-access-token:${{ secrets.SUBMODULE_GITHUB_TOKEN }}@github.com" >> ~/.git-credentials
 
-            - name: tell git to use https instead of ssh whenever it encounters it
+            - name: Tell git to use https instead of ssh whenever it encounters it
               run: 'git config --global url."https://github.com/".insteadof git@github.com:'
 
             - name: Git submodule initialization
@@ -49,11 +49,8 @@ jobs:
               run: |
                   python3 -m coverage run -m pytest tests --junitxml=report.xml; coverage report -i --include=src/*; coverage xml -i --include=src/*;
 
-            - name: Upload coverage to Codecov
-              uses: codecov/codecov-action@v1
-              with:
-                  token: ${{ secrets.CODECOV_TOKEN }} # Not required for public repos
-                  file: ./coverage.xml
-                  flags: unittests
-                  name: codecov-umbrella
-                  fail_ci_if_error: true
+            - name: Upload coverage reports to Codecov
+              uses: codecov/codecov-action@v4.0.1
+              env:
+                  token: ${{ secrets.CODECOV_TOKEN }}
+                  slug: Digital-Dermatology/SelfClean
diff --git a/tests/unittests/cleaner/label_errors/test_intra_extra_distance.py b/tests/unittests/cleaner/label_errors/test_intra_extra_distance.py
@@ -39,8 +39,9 @@ def test_exact_duplicate_with_diff_label(self):
         cleaner.fit(emb_space=emb_space, labels=labels)
         out_dict = cleaner.predict()
 
-        self.assertTrue(
-            (out_dict["label_errors"]["indices"][:2] == [0, len(emb_space) - 1]).all()
+        np.testing.assert_array_equal(
+            np.sort(out_dict["label_errors"]["indices"][:2]),
+            np.sort(np.asarray([0, len(emb_space) - 1])),
         )
         self.assertAlmostEqual(out_dict["label_errors"]["scores"][0], 0)