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DESCRIPTION
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DESCRIPTION
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Package: pavian
Type: Package
Title: Visualize and analyze metagenomics classification results
Version: 1.0.0
URL: https://github.com/fbreitwieser/pavian
BugReports: https://github.com/fbreitwieser/pavian/issues
Authors@R: person("Florian P", "Breitwieser", email = "fpbreitwieser@gmail.com", role = c("aut", "cre"))
Description: R package and Shiny app to visualize and analyze metagenomics classification results from
Kraken, Centrifuge and MetaPhlAn.
Imports: shiny (>= 0.1.12), shinydashboard, shinyjs, shinyWidgets (>=
0.4.1.970), DT, dplyr, htmltools, htmlwidgets, plyr, rmarkdown,
sankeyD3, shinyFileTree, RColorBrewer, colorspace, ggplot2,
rhandsontable
Suggests: BiocManager, Rsamtools, knitr
Remotes: github::fbreitwieser/sankeyD3,
github::fbreitwieser/shinyFileTree
License: GPL-3
LazyData: TRUE
RoxygenNote: 6.1.1
VignetteBuilder: knitr
NeedsCompilation: no