Generate new dataset.

.github/workflows/run_dataset_generation.yaml

@@ -1,36 +1,35 @@
-# name: Unit Testing Pipeline
+name: Unit Testing Pipeline
 
-# on: 
-#   push:
+on: 
+  push:
 
-# jobs:
-#   test-ubuntu:
-#     runs-on: ubuntu-latest
-#     strategy:
-#       matrix:
-#         python-version: ["3.8"]
-#     steps:
-#       - uses: actions/checkout@v4
-#       - name: Setup python ${{ matrix.python-version }}
-#         uses: actions/setup-python@v5
-#         with:
-#           python-version: ${{ matrix.python-version }}
-#           cache: 'pip'
-#       - name: Install octave
-#         run: |
-#           sudo apt-get update
-#           sudo apt-get install -y build-essential octave
-#       - name: Install pyspi dependencies
-#         run: |
-#           python -m pip install --upgrade pip
-#           pip install -r requirements.txt
-#           pip install .
-#       - name: Run data generation
-#         run: |
-#           python tests/generate_benchmark_tables.py
-#       - name: Upload artifact
-#         uses: actions/upload-artifact@v3
-#         with:
-#           name: benchmark-tables
-#           path: tests/CML7_benchmark_tables_new.pkl
-#
+jobs:
+  test-ubuntu:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ["3.9"]
+    steps:
+      - uses: actions/checkout@v4
+      - name: Setup python ${{ matrix.python-version }}
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+          cache: 'pip'
+      - name: Install octave
+        run: |
+          sudo apt-get update
+          sudo apt-get install -y build-essential octave
+      - name: Install pyspi dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install -r requirements.txt
+          pip install .
+      - name: Run data generation
+        run: |
+          python tests/generate_benchmark_tables.py
+      - name: Upload artifact
+        uses: actions/upload-artifact@v3
+        with:
+          name: benchmark-tables
+          path: tests/CML7_benchmark_tables_new.pkl

.github/workflows/run_unit_tests.yaml

@@ -1,35 +1,34 @@
-name: Unit Testing Pipeline
+# name: Unit Testing Pipeline
 
-on: 
-  push:
+# on: 
+#   push:
 
-jobs:
-  test-ubuntu:
-    runs-on: ubuntu-latest
-    strategy:
-      matrix:
-        python-version: ["3.8", "3.9"]
-    steps:
-      - uses: actions/checkout@v4
-      - name: Setup python ${{ matrix.python-version }}
-        uses: actions/setup-python@v5
-        with:
-          python-version: ${{ matrix.python-version }}
-          cache: 'pip'
-      - name: Install octave
-        run: |
-          sudo apt-get update
-          sudo apt-get install -y build-essential octave
-      - name: Install pyspi dependencies
-        run: |
-          python -m pip install --upgrade pip
-          pip install -r requirements.txt
-          pip install .
-      - name: Run pyspi calculator/utils unit tests
-        run: |
-          pytest -v ./tests/test_calc.py
-          pytest -v ./tests/test_utils.py
-      - name: Run pyspi SPI unit tests
-        run: |
-          pytest -v ./tests/test_SPIs.py
-        
+# jobs:
+#   test-ubuntu:
+#     runs-on: ubuntu-latest
+#     strategy:
+#       matrix:
+#         python-version: ["3.8", "3.9"]
+#     steps:
+#       - uses: actions/checkout@v4
+#       - name: Setup python ${{ matrix.python-version }}
+#         uses: actions/setup-python@v5
+#         with:
+#           python-version: ${{ matrix.python-version }}
+#           cache: 'pip'
+#       - name: Install octave
+#         run: |
+#           sudo apt-get update
+#           sudo apt-get install -y build-essential octave
+#       - name: Install pyspi dependencies
+#         run: |
+#           python -m pip install --upgrade pip
+#           pip install -r requirements.txt
+#           pip install .
+#       - name: Run pyspi calculator/utils unit tests
+#         run: |
+#           pytest -v ./tests/test_calc.py
+#           pytest -v ./tests/test_utils.py
+#       - name: Run pyspi SPI unit tests
+#         run: |
+#           pytest -v ./tests/test_SPIs.py

tests/generate_benchmark_tables.py

@@ -27,7 +27,7 @@ def get_benchmark_tables(calc_list):
 # create list to store the calculator objects
 store_calcs = list()
 
-for i in range(3):
+for i in range(75):
     np.random.seed(42)
     calc = Calculator(dataset=dataset)
     calc.compute()