Updated links, DOI and folder structure for corrected BIDS version

EIT-team · Apr 9, 2018 · ea2ac80 · ea2ac80
1 parent bcaadbf
commit ea2ac80
Show file tree

Hide file tree

Showing 3 changed files with 30 additions and 30 deletions.
diff --git a/Anonymised_Radiology/ZipRad.sh b/Anonymised_Radiology/ZipRad.sh
@@ -1,28 +1,28 @@
 
 #!/usr/bin/env sh
 echo 'ZIPPING STUFF'
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_01.zip sub-01
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_03.zip sub-03
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_04.zip sub-04
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_05.zip sub-05
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_06.zip sub-06
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_07.zip sub-07
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_09.zip sub-09
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_10.zip sub-10
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_11.zip sub-11
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_12.zip sub-12
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_14.zip sub-14
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_15.zip sub-15
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_16.zip sub-16
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_17.zip sub-17
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_18.zip sub-18
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_19.zip sub-19
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_20.zip sub-20
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_21.zip sub-21
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_23.zip sub-23
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_24.zip sub-24
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_25.zip sub-25
-'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_26.zip sub-26
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_01.zip pat-01
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_03.zip pat-03
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_04.zip pat-04
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_05.zip pat-05
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_06.zip pat-06
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_07.zip pat-07
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_09.zip pat-09
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_10.zip pat-10
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_11.zip pat-11
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_12.zip pat-12
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_14.zip pat-14
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_15.zip pat-15
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_16.zip pat-16
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_17.zip pat-17
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_18.zip pat-18
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_19.zip pat-19
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_20.zip pat-20
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_21.zip pat-21
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_23.zip pat-23
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_24.zip pat-24
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_25.zip pat-25
+'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_26.zip pat-26
 
 echo 'ALL DONE'
 

diff --git a/Anonymised_Radiology/readme.md b/Anonymised_Radiology/readme.md
@@ -2,19 +2,19 @@
 
 ## Usage
 
-Extract all archives `Patient_Reports_01.zip,  Patient_Reports_02.zip ...Patient_Reports_26.zip` from [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199641.svg)](https://doi.org/10.5281/zenodo.1199641) into this directory so the structure is:
+Extract all archives `Patient_Reports_01.zip,  Patient_Reports_02.zip ...Patient_Reports_26.zip` from [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1215676.svg)](https://doi.org/10.5281/zenodo.1215676) into this directory so the structure is:
 
 ```
-|---P_01
+|---pat-01
 |   |---func
-|   |   |---sub-01_CT_Plain_Brain_Stroke.json
-|   |   |---sub-01_CT_Plain_Brain_Stroke.nii.gz
+|   |   |---pat-01_CT_Plain_Brain_Stroke.json
+|   |   |---pat-01_CT_Plain_Brain_Stroke.nii.gz
 |   |   |...
 |   |---Patient01.pdf
-|---P_03
+|---pat-03
 |   |---func
-|   |   |---sub-03_CT_Plain_Brain_(Stroke).json
-|   |   |---sub-03_CT_Plain_Brain_(Stroke).nii.gz
+|   |   |---pat-03_CT_Plain_Brain_(Stroke).json
+|   |   |---pat-03_CT_Plain_Brain_(Stroke).nii.gz
 |   |   |...
 |   |---Patient03.pdf
 ...

diff --git a/readme.md b/readme.md
@@ -51,7 +51,7 @@ The raw `.bdf` files are available should you wish to recreate or alter the proc
 -   Subject data: [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199523.svg)](https://doi.org/10.5281/zenodo.1199523)  into the `./Subjects` folder
 -   Patient data (part 1): [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199529.svg)](https://doi.org/10.5281/zenodo.1199529)  into the `./Patients` folder
 -   Patient data (part 2): [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199630.svg)](https://doi.org/10.5281/zenodo.1199630)  into the `./Patients` folder
--   Radiology data: [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199641.svg)](https://doi.org/10.5281/zenodo.1199641) into the `./Anonymised_Radiology` folder
+-   Radiology data: [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1215676.svg)](https://doi.org/10.5281/zenodo.1215676) into the `./Anonymised_Radiology` folder
 
 Example structures for these directories are given in the readmes.