diff --git a/Anonymised_Radiology/ZipRad.sh b/Anonymised_Radiology/ZipRad.sh index dca828e..3d860f7 100644 --- a/Anonymised_Radiology/ZipRad.sh +++ b/Anonymised_Radiology/ZipRad.sh @@ -1,28 +1,28 @@ #!/usr/bin/env sh echo 'ZIPPING STUFF' -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_01.zip sub-01 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_03.zip sub-03 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_04.zip sub-04 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_05.zip sub-05 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_06.zip sub-06 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_07.zip sub-07 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_09.zip sub-09 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_10.zip sub-10 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_11.zip sub-11 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_12.zip sub-12 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_14.zip sub-14 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_15.zip sub-15 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_16.zip sub-16 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_17.zip sub-17 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_18.zip sub-18 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_19.zip sub-19 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_20.zip sub-20 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_21.zip sub-21 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_23.zip sub-23 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_24.zip sub-24 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_25.zip sub-25 -'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_26.zip sub-26 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_01.zip pat-01 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_03.zip pat-03 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_04.zip pat-04 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_05.zip pat-05 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_06.zip pat-06 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_07.zip pat-07 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_09.zip pat-09 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_10.zip pat-10 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_11.zip pat-11 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_12.zip pat-12 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_14.zip pat-14 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_15.zip pat-15 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_16.zip pat-16 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_17.zip pat-17 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_18.zip pat-18 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_19.zip pat-19 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_20.zip pat-20 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_21.zip pat-21 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_23.zip pat-23 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_24.zip pat-24 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_25.zip pat-25 +'C:\Program Files\7-Zip\7z.exe' a Patient_Reports_26.zip pat-26 echo 'ALL DONE' diff --git a/Anonymised_Radiology/readme.md b/Anonymised_Radiology/readme.md index 9e3602e..8459024 100644 --- a/Anonymised_Radiology/readme.md +++ b/Anonymised_Radiology/readme.md @@ -2,19 +2,19 @@ ## Usage -Extract all archives `Patient_Reports_01.zip, Patient_Reports_02.zip ...Patient_Reports_26.zip` from [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199641.svg)](https://doi.org/10.5281/zenodo.1199641) into this directory so the structure is: +Extract all archives `Patient_Reports_01.zip, Patient_Reports_02.zip ...Patient_Reports_26.zip` from [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1215676.svg)](https://doi.org/10.5281/zenodo.1215676) into this directory so the structure is: ``` -|---P_01 +|---pat-01 | |---func -| | |---sub-01_CT_Plain_Brain_Stroke.json -| | |---sub-01_CT_Plain_Brain_Stroke.nii.gz +| | |---pat-01_CT_Plain_Brain_Stroke.json +| | |---pat-01_CT_Plain_Brain_Stroke.nii.gz | | |... | |---Patient01.pdf -|---P_03 +|---pat-03 | |---func -| | |---sub-03_CT_Plain_Brain_(Stroke).json -| | |---sub-03_CT_Plain_Brain_(Stroke).nii.gz +| | |---pat-03_CT_Plain_Brain_(Stroke).json +| | |---pat-03_CT_Plain_Brain_(Stroke).nii.gz | | |... | |---Patient03.pdf ... diff --git a/readme.md b/readme.md index 0e41737..cf89a5d 100644 --- a/readme.md +++ b/readme.md @@ -51,7 +51,7 @@ The raw `.bdf` files are available should you wish to recreate or alter the proc - Subject data: [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199523.svg)](https://doi.org/10.5281/zenodo.1199523) into the `./Subjects` folder - Patient data (part 1): [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199529.svg)](https://doi.org/10.5281/zenodo.1199529) into the `./Patients` folder - Patient data (part 2): [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199630.svg)](https://doi.org/10.5281/zenodo.1199630) into the `./Patients` folder -- Radiology data: [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199641.svg)](https://doi.org/10.5281/zenodo.1199641) into the `./Anonymised_Radiology` folder +- Radiology data: [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1215676.svg)](https://doi.org/10.5281/zenodo.1215676) into the `./Anonymised_Radiology` folder Example structures for these directories are given in the readmes.