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@EMBL-Hentze-group

EMBL Hentze group

Github page for Hentze group at EMBL Heidelberg

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  1. DEWSeq DEWSeq Public

    R/Bioconductor package for e/iCLIP data analysis

    R 5 1

  2. htseq-clip htseq-clip Public

    a toolset designed for the processing and analysis of eCLIP/iCLIP dataset

    Python 3 1

  3. DEWSeq_Bioconductor_docker DEWSeq_Bioconductor_docker Public

    Dockerfile for Bioconductor release and devel versions with all DEWSeq dependecies installed

    Dockerfile

  4. pygtftk pygtftk Public

    Forked from dputhier/pygtftk

    A python package and a set of shell commands to handle GTF files

    Python

  5. DEWSeq_analysis_helpers DEWSeq_analysis_helpers Public

    This repository contains helper analysis scripts and description of the analysis steps used in i/eCLIP data analysis using DEWSeq

    HTML

  6. arnie arnie Public

    Forked from DasLab/arnie

    Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.

    Jupyter Notebook

Repositories

Showing 6 of 6 repositories
  • DEWSeq Public

    R/Bioconductor package for e/iCLIP data analysis

    EMBL-Hentze-group/DEWSeq’s past year of commit activity
    R 5 1 1 0 Updated Mar 13, 2024
  • htseq-clip Public

    a toolset designed for the processing and analysis of eCLIP/iCLIP dataset

    EMBL-Hentze-group/htseq-clip’s past year of commit activity
    Python 3 MIT 1 1 0 Updated Apr 25, 2023
  • DEWSeq_analysis_helpers Public

    This repository contains helper analysis scripts and description of the analysis steps used in i/eCLIP data analysis using DEWSeq

    EMBL-Hentze-group/DEWSeq_analysis_helpers’s past year of commit activity
    HTML 0 MIT 0 1 0 Updated Dec 6, 2021
  • DEWSeq_Bioconductor_docker Public

    Dockerfile for Bioconductor release and devel versions with all DEWSeq dependecies installed

    EMBL-Hentze-group/DEWSeq_Bioconductor_docker’s past year of commit activity
    Dockerfile 0 MIT 0 0 0 Updated Oct 11, 2021
  • arnie Public Forked from DasLab/arnie

    Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.

    EMBL-Hentze-group/arnie’s past year of commit activity
    Jupyter Notebook 0 MIT 31 0 0 Updated May 25, 2021
  • pygtftk Public Forked from dputhier/pygtftk

    A python package and a set of shell commands to handle GTF files

    EMBL-Hentze-group/pygtftk’s past year of commit activity
    Python 0 GPL-3.0 6 0 0 Updated Nov 9, 2020

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