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amino_acid_properties.txt
21 lines (21 loc) · 8.36 KB
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amino_acid_properties.txt
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Sigla Name Volume Log(Solubility (m at 20ºC)) Hydrophobicity Isoelectric point P(helix) nOats in side chain nSats in side chain nNats in side chain Steric hindrance nH-bonds Vol / log(solub) Vol / P(helix) Vol / P(sheet) log(Solub) x Flex Steric hindrance x Flexibility Flexibility P(helix)+P(sheet) log(Solub) x Hydrophobicity Hydrophobicity x Flex. V / (P(helix)+P(sheet)) Steric hindrance / P(helix) Isoelectric point / P(sheet) P(sheet) Vol x isoelectric point Isoelectric point / P(helix) P(helix) / P(sheet) Steric hindrance / P(sheet) P(helix) x Flex.
A ala 88.6 0.271144317949078 0.310000000000000 6.11000000000000 0.420000000000000 0 0 0 1.28000000000000 0 326.763255340056 210.952380952381 385.217391304348 4.88059772308341 23.0400000000000 18 0.650000000000000 0.0840547385642143 5.58000000000000 136.307692307692 3.04761904761905 26.5652173913043 0.230000000000000 541.346000000000 14.5476190476191 1.82608695652174 5.56521739130435 7.56000000000000
C cys 108.5 -0.675717544702307 1.54000000000000 6.35000000000000 0.170000000000000 0 1 0 1.77000000000000 3 -160.570050090679 638.235294117647 264.634146341463 -16.8929386175577 44.2500000000000 25 0.580000000000000 -1.04060501884155 38.5000000000000 187.068965517241 10.4117647058824 15.4878048780488 0.410000000000000 688.975000000000 37.3529411764706 0.414634146341463 4.31707317073171 4.25000000000000
D asp 111.1 -1.42021640338319 -0.770000000000000 2.95000000000000 0.250000000000000 2 0 0 1.60000000000000 4 -78.2275150007713 444.400000000000 555.500000000000 -28.4043280676638 32 20 0.450000000000000 1.09356663060506 -15.4000000000000 246.888888888889 6.40000000000000 14.7500000000000 0.200000000000000 327.745000000000 11.8000000000000 1.25000000000000 8 5
E glu 138.4 -1.22184874961636 -0.640000000000000 3.09000000000000 0.420000000000000 2 0 0 1.56000000000000 4 -113.270975678009 329.523809523810 659.047619047619 -9.89697487189249 12.6360000000000 8.10000000000000 0.630000000000000 0.781983199754468 -5.18400000000000 219.682539682540 3.71428571428571 14.7142857142857 0.210000000000000 427.656000000000 7.35714285714286 2 7.42857142857143 3.40200000000000
F phe 189.9 -0.769551078621726 1.79000000000000 5.67000000000000 0.300000000000000 0 0 0 2.94000000000000 0 -246.767245574021 633 499.736842105263 -5.84858819752512 22.3440000000000 7.60000000000000 0.680000000000000 -1.37749643073289 13.6040000000000 279.264705882353 9.80000000000000 14.9210526315789 0.380000000000000 1076.73300000000 18.9000000000000 0.789473684210526 7.73684210526316 2.28000000000000
G gly 60.1 0.527629900871339 0 6.07000000000000 0.130000000000000 0 0 0 0 0 113.905599172355 462.307692307692 400.666666666667 20.5775661339822 0 39 0.280000000000000 0 0 214.642857142857 0 40.4666666666667 0.150000000000000 364.807000000000 46.6923076923077 0.866666666666667 0 5.07000000000000
H his 153.2 -0.551293680094920 0.130000000000000 7.69000000000000 0.270000000000000 0 0 2 2.99000000000000 3 -277.891812533789 567.407407407407 510.666666666667 -2.64620966445562 14.3520000000000 4.80000000000000 0.570000000000000 -0.0716681784123396 0.624000000000000 268.771929824561 11.0740740740741 25.6333333333333 0.300000000000000 1178.10800000000 28.4814814814815 0.900000000000000 9.96666666666667 1.29600000000000
I ile 166.7 -0.616184634019569 1.80000000000000 6.04000000000000 0.300000000000000 0 0 0 4.19000000000000 0 -270.535795273833 555.666666666667 370.444444444444 -1.41722465824501 9.63700000000000 2.30000000000000 0.750000000000000 -1.10913234123522 4.14000000000000 222.266666666667 13.9666666666667 13.4222222222222 0.450000000000000 1006.86800000000 20.1333333333333 0.666666666666667 9.31111111111111 0.690000000000000
K lys 168.6 0.227115082589125 -0.990000000000000 9.99000000000000 0.320000000000000 0 0 1 1.89000000000000 3 742.354924551686 526.875000000000 624.444444444444 0.772191280803026 6.42600000000000 3.40000000000000 0.590000000000000 -0.224843931763234 -3.36600000000000 285.762711864407 5.90625000000000 37 0.270000000000000 1684.31400000000 31.2187500000000 1.18518518518519 7.00000000000000 1.08800000000000
L leu 166.7 -0.777283528852417 1.70000000000000 6.04000000000000 0.390000000000000 0 0 0 2.59000000000000 0 -214.464855888708 427.435897435897 537.741935483871 -7.77283528852417 25.9000000000000 10 0.700000000000000 -1.32138199904911 17 238.142857142857 6.64102564102564 19.4838709677419 0.310000000000000 1006.86800000000 15.4871794871795 1.25806451612903 8.35483870967742 3.90000000000000
M met 162.9 -0.425968732272281 1.23000000000000 5.71000000000000 0.380000000000000 0 1 0 2.35000000000000 0 -382.422435400431 428.684210526316 509.062500000000 -5.96356225181194 32.9000000000000 14 0.700000000000000 -0.523941540694906 17.2200000000000 232.714285714286 6.18421052631579 17.8437500000000 0.320000000000000 930.159000000000 15.0263157894737 1.18750000000000 7.34375000000000 5.32000000000000
N asn 114.1 -0.721246399047171 -0.600000000000000 6.52000000000000 0.210000000000000 1 0 1 1.60000000000000 5 -158.198363486786 543.333333333333 518.636363636364 -14.4249279809434 32 20 0.430000000000000 0.432747839428303 -12 265.348837209302 7.61904761904762 29.6363636363636 0.220000000000000 743.932000000000 31.0476190476190 0.954545454545455 7.27272727272727 4.20000000000000
P pro 112.7 1.05300157040031 0.720000000000000 6.80000000000000 0.130000000000000 0 0 0 2.67000000000000 0 107.027380744699 866.923076923077 331.470588235294 0.105300157040031 0.267000000000000 0.100000000000000 0.470000000000000 0.758161130688222 0.0720000000000000 239.787234042553 20.5384615384615 20.0000000000000 0.340000000000000 766.360000000000 52.3076923076923 0.382352941176471 7.85294117647059 0.0130000000000000
Q gln 143.8 -0.536107011014093 -0.220000000000000 5.65000000000000 0.360000000000000 1 0 1 1.56000000000000 5 -268.230030657480 399.444444444445 575.200000000000 -3.85997047930147 11.2320000000000 7.20000000000000 0.610000000000000 0.117943542423100 -1.58400000000000 235.737704918033 4.33333333333333 22.6000000000000 0.250000000000000 812.470000000000 15.6944444444444 1.44000000000000 6.24000000000000 2.59200000000000
R arg 173.4 0.0511525224473813 -1.01000000000000 10.7400000000000 0.360000000000000 0 0 3 2.34000000000000 7 3389.86215544639 481.666666666667 693.600000000000 0.235301603257954 10.7640000000000 4.60000000000000 0.610000000000000 -0.0516640476718551 -4.64600000000000 284.262295081967 6.50000000000000 42.9600000000000 0.250000000000000 1862.31600000000 29.8333333333333 1.44000000000000 9.36000000000000 1.65600000000000
S ser 89 0.541579243946581 -0.0400000000000000 5.70000000000000 0.200000000000000 1 0 0 1.31000000000000 3 164.334215158324 445 317.857142857143 13.5394810986645 32.7500000000000 25 0.480000000000000 -0.0216631697578632 -1 185.416666666667 6.55000000000000 20.3571428571429 0.280000000000000 507.300000000000 28.5000000000000 0.714285714285714 4.67857142857143 5
T thr 116.1 -0.0851281824599496 0.260000000000000 5.60000000000000 0.210000000000000 1 0 0 3.03000000000000 3 -1363.82566436940 552.857142857143 322.500000000000 -0.936410007059446 33.3300000000000 11 0.570000000000000 -0.0221333274395869 2.86000000000000 203.684210526316 14.4285714285714 15.5555555555556 0.360000000000000 650.160000000000 26.6666666666667 0.583333333333333 8.41666666666667 2.31000000000000
V val 140 -0.300162274132754 1.22000000000000 6.02000000000000 0.270000000000000 0 0 0 3.67000000000000 0 -466.414376705054 518.518518518519 285.714285714286 -0.900486822398263 11.0100000000000 3 0.760000000000000 -0.366197974441960 3.66000000000000 184.210526315789 13.5925925925926 12.2857142857143 0.490000000000000 842.800000000000 22.2962962962963 0.551020408163265 7.48979591836735 0.810000000000000
W trp 227.8 -1.18708664335714 2.25000000000000 5.94000000000000 0.320000000000000 0 0 1 3.21000000000000 1 -191.898376815840 711.875000000000 542.380952380952 -4.51092924475715 12.1980000000000 3.80000000000000 0.740000000000000 -2.67094494755357 8.55000000000000 307.837837837838 10.0312500000000 14.1428571428571 0.420000000000000 1353.13200000000 18.5625000000000 0.761904761904762 7.64285714285714 1.21600000000000
Y tyr 193.6 -2.52287874528034 0.960000000000000 5.66000000000000 0.250000000000000 1 0 0 2.94000000000000 3 -76.7377347651671 774.400000000000 472.195121951220 -19.1738784641306 22.3440000000000 7.60000000000000 0.660000000000000 -2.42196359546912 7.29600000000000 293.333333333333 11.7600000000000 13.8048780487805 0.410000000000000 1095.77600000000 22.6400000000000 0.609756097560976 7.17073170731707 1.90000000000000