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Issues list

ERROR: An error was encountered while running hmmsearch. error Help required for a GTDB-Tk error.
#612 opened Nov 18, 2024 by J-Weijie98
Skani external command error error Help required for a GTDB-Tk error.
#606 opened Oct 14, 2024 by magicprotoss
Troubleshooting GTDB-Tk Database Installation and Environment Configuration error Help required for a GTDB-Tk error.
#596 opened Jul 16, 2024 by soojunglee98
3 tasks
Total genome counter in log is off (warning message) error Help required for a GTDB-Tk error.
#585 opened Apr 26, 2024 by GabeAl
Error running Prodigal on genome error Help required for a GTDB-Tk error.
#566 opened Dec 20, 2023 by fhdbqr
2 tasks
Slow download speed v214
#522 opened Jun 2, 2023 by kafker
Use Pyrodigal as Prodigal alternative enhancement Proposed feature or change to GTDB-Tk.
#456 opened Dec 5, 2022 by lfenske-93
Write debug file on exception enhancement Proposed feature or change to GTDB-Tk.
#432 opened Sep 11, 2022 by aaronmussig
Subroutines for classify enhancement Proposed feature or change to GTDB-Tk.
#358 opened Nov 8, 2021 by SilasK
Unnecessary computation in de novo workflow enhancement Proposed feature or change to GTDB-Tk.
#243 opened Apr 20, 2020 by donovan-h-parks
Establish novelty of user genomes enhancement Proposed feature or change to GTDB-Tk.
#233 opened Mar 13, 2020 by donovan-h-parks
Add checkpointing enhancement Proposed feature or change to GTDB-Tk.
#207 opened Dec 12, 2019 by aaronmussig
Non-parametric bootstraps enhancement Proposed feature or change to GTDB-Tk.
#116 opened Apr 17, 2019 by donovan-h-parks
ProTip! What’s not been updated in a month: updated:<2024-11-24.