Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update VEuPathDB meta keys #360

Closed
wants to merge 3 commits into from
Closed

Conversation

JAlvarezJarreta
Copy link
Contributor

@JAlvarezJarreta JAlvarezJarreta commented May 10, 2024

Add build_version meta key, rename component to component_db and replace BRC4 by VEuPathDB (or vpdb). Have replaced things only in scripts and src/python/ensembl/io/genomio realms (as well as unit tests), since I didn't know if other areas are currently used.

Datachecks have also been updated accordingly: Ensembl/ensembl-datacheck#587 .

I have left aside changing all --brc flags and brc_mode variables to vpdb for a future PR, once GenomIO has been cleaned-up a little (at the moment it is has to pin point what needs to be changed and what not).

@JAlvarezJarreta JAlvarezJarreta deleted the jalvarez/mv_brc_to_vpdb branch July 23, 2024 12:57
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant