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Add
build_version
meta key, renamecomponent
tocomponent_db
and replaceBRC4
byVEuPathDB
(orvpdb
). Have replaced things only inscripts
andsrc/python/ensembl/io/genomio
realms (as well as unit tests), since I didn't know if other areas are currently used.Datachecks have also been updated accordingly: Ensembl/ensembl-datacheck#587 .
I have left aside changing all
--brc
flags andbrc_mode
variables tovpdb
for a future PR, once GenomIO has been cleaned-up a little (at the moment it is has to pin point what needs to be changed and what not).