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ActiPASS project folder structure

PeterJJohansson edited this page Jul 13, 2022 · 34 revisions

ActiPASS project folder structure

Project-folder-structure

1) BatchOut

This folder is where you shall start to look for your results. This folder contains the results and visualisations in separate folders, for each batch. In each batch folder the diaries, quality check logs and visualisations (.png files) for each individual is stored.

Tips! -You can easily perform the quality check of your data by quickly browsing the visualisation (.png files) in the BatchOut folders by using the preview function in your file explorer

In the file "ActiPASS_BatchQC" information that may be valuable when you perform the quality check of your batch is stored.

There is also one important file "ActiPASS_BatchSettings" with information about all settings and parameters that was used for the actual batch. If you have forgot what settings that you have used when you processed the data you can find that in this file

There is also one file "ActiPASS_BatchLog" with information about the batch processing.

2) CrashLogs

Here you can find crash logs with information that may be useful for the developer if something went wrong when running ActiPASS.

3) IndividualOut

Here the results is stored in separate folders for each individual. If you have chosen to create "full" visualisations there are individual weekly histograms and piecharts visualisations as well as weekly activity visualisations that can be used for feedback to the participants.

There is also more specific information from the sleep algorihm and individual files for the dayly activities that are available here.

In this folder there is also a matlab data table with the activities second second for each individual, and warnings that may have been generated during the processing of the individual data.

4) QC_Distributions

Here you find the distributsions in histograms (*.png files) for each activity type. These distibutions is valuable to use when you perform you quality check and shall find eventual outliers in your data. In the excel files the participants ID is shown.

Tips!- by opening the SubjectID_ Distributions.xls filex in excel you can zoom out in excel and then you can visualise an upside down histogram with the participant ID's.

5) ActiPASS_Daily_WideFormat_MasterFile.csv

This is your main result file that contains merged data from one or several batches. The file contains all default variables that is needed for most types of analysis. For more information about the variable definitions we refer to ActiPASS variable dictionary. The file is created after you have run the stat genereation module in ActiPASS

6) ActiPASS_QC_MasterFile.csv

This file contains merged data that is useful for the quality check