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Replace GenomicFeatures::makeTxDbFromGFF with txdbmaker::makeTxDbFromGFF #22

Replace GenomicFeatures::makeTxDbFromGFF with txdbmaker::makeTxDbFromGFF

Replace GenomicFeatures::makeTxDbFromGFF with txdbmaker::makeTxDbFromGFF #22

Triggered via pull request March 26, 2024 17:16
@hpageshpages
opened #28
master
Status Failure
Total duration 7m 49s
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check-bioc.yml

on: pull_request
Matrix: build-check
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6 errors and 10 warnings
ubuntu-latest (4.3)
Process completed with exit code 1.
windows-latest (4.3)
Failed to install 'RNAmodR' from local:
windows-latest (4.3)
Process completed with exit code 1.
windows-latest (4.3)
package or namespace load failed for 'AnnotationHub' in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
macOS-latest (4.3)
Failed to install 'RNAmodR' from local:
macOS-latest (4.3)
Process completed with exit code 1.
ubuntu-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (4.3)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (4.3)
replacing previous import 'utils::findMatches' by 'S4Vectors::findMatches' when loading 'ExperimentHubData'
windows-latest (4.3)
replacing previous import 'utils::findMatches' by 'S4Vectors::findMatches' when loading 'ExperimentHubData'
windows-latest (4.3)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (4.3)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘ExperimentHubData’
macOS-latest (4.3)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘ExperimentHubData’
macOS-latest (4.3)
No files were found with the provided path: check. No artifacts will be uploaded.