Calculations completed, but plotting failed: Unrecognized HGVS string

[cfblaeb]

Hi,
I have installed enrich2-dev branch in a python2 environment.
When running an analysis (log ratios (enrich2)+wild type) using the enrich2 gui I get the following error message:

Calculations completed, but plotting failed: Unrecognized HGVS string.

I click ok to that and it continues and finally declares analysis complete.
It seems to write some plots correctly, "sequence_function_map_nt.pdf", "timepoint_counts.pdf" and 1 plot incorrectly (invalid pdf): "diversity_nt.pdf"

e2analysis.txt
log.txt

[afrubin]

Thanks for your bug report. When you look at the the tab-separated output files, do they look correct? This looks like something went wrong with the logging format.

If you're using pip for package management, would you please upload the output from pip freeze? If you're using conda please upload the output from conda list.

[cfblaeb]

backports.functools-lru-cache==1.5
backports.shutil-get-terminal-size==1.0.0
cycler==0.10.0
decorator==4.3.0
Enrich2==1.2.0
enum34==1.1.6
ipython==5.7.0
ipython-genutils==0.2.0
kiwisolver==1.0.1
matplotlib==2.2.2
numexpr==2.6.5
numpy==1.14.5
pandas==0.19.2
pathlib2==2.3.2
patsy==0.5.0
pexpect==4.6.0
pickleshare==0.7.4
prompt-toolkit==1.0.15
ptyprocess==0.5.2
Pygments==2.2.0
pyparsing==2.2.0
python-dateutil==2.7.3
pytz==2018.4
scandir==1.7
scipy==1.1.0
simplegeneric==0.8.1
six==1.11.0
statsmodels==0.9.0
subprocess32==3.5.1
tables==3.4.4
traitlets==4.3.2
wcwidth==0.1.7