v1.4-beta.2
Pre-release
Pre-release
·
2 commits
to SEACRv1.4_dev
since this release
v1.4-beta.2 is an update to v1.4-beta.1 with bug fixes for variable assignments and random string assignments
SEACR 1.4 development release contains the following changes:
- Added dashed command line parameter support: inputs 1, 2, 3, 4, and 5 now correspond to -b, -c, -n, -m, and -o, respectively
- Added a function to test a window of control scaling thresholds in order to render scaling more stable in "norm" mode
- Added an optional input for a numeric peak extension factor (-e) during peak merging, where all peaks will be extended by e*(mean(peak length)) (default = 0.1)
- Added an optional yes/no input to dictate whether peaks overlapping robust IgG peaks get filtered out or not (-r) (default = "yes")
- Fixed a bug in which empty peak files failed due to a division by zero error before completion
- Fixed a bug in which "NaN" is erroneously passed to quantile() in files with a low complexity of peaks