NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(AddConnectivity,CorrelationNetwork)
S3method(AddConnectivity,default)
S3method(AddNetwork,ExpAssayFrame)
S3method(AddNetwork,default)
S3method(AddPhenotype,ExpAssayFrame)
S3method(AddPhenotype,ExpAssayTable)
S3method(AddPhenotype,default)
S3method(BindModuleSignificance,CorrelationNetwork)
S3method(BindModuleSignificance,default)
S3method(GeneSignificance,CorrelationNetwork)
S3method(GeneSignificance,default)
S3method(GetConnectivity,CorrelationNetwork)
S3method(GetConnectivity,default)
S3method(GetHubGenes,CorrelationNetwork)
S3method(GetHubGenes,default)
S3method(GetRelatedHubGenes,CorrelationNetwork)
S3method(GetRelatedHubGenes,default)
S3method(GetSignificantGenes,CorrelationNetwork)
S3method(GetSignificantGenes,default)
S3method(Histogram,ExpAssayFrame)
S3method(Histogram,default)
S3method(LogTransform,ExpAssayFrame)
S3method(LogTransform,default)
S3method(ModuleMembership,CorrelationNetwork)
S3method(ModuleMembership,default)
S3method(ModulePlot,CorrelationNetwork)
S3method(ModulePlot,default)
S3method(ModuleSignificance,CorrelationNetwork)
S3method(ModuleSignificance,default)
S3method(ModuleTraitHeatmap,CorrelationNetwork)
S3method(ModuleTraitHeatmap,default)
S3method(Normalize,ExpAssayFrame)
S3method(Normalize,default)
S3method(PickThreshold,ExpAssayFrame)
S3method(PickThreshold,default)
S3method(QC,ProteinGroups)
S3method(QC,default)
S3method(Reshape,ProteinGroups)
S3method(Reshape,default)
S3method(SampleTree,ExpAssayFrame)
S3method(SampleTree,default)
S3method(Subset,ExpAssayFrame)
S3method(Subset,ExpAssayTable)
S3method(Subset,default)
S3method(Tidy,ExpAssayTable)
S3method(Tidy,default)
S3method(print,ExpAssayFrame)
S3method(print,ExpAssayTable)
S3method(print,ExperimentList)
export(AddConnectivity)
export(AddNetwork)
export(AddPhenotype)
export(BindModuleSignificance)
export(GeneSignificance)
export(GeneTree)
export(GetConnectivity)
export(GetHubGenes)
export(GetRelatedHubGenes)
export(GetSignificantGenes)
export(Histogram)
export(LogTransform)
export(ModuleMembership)
export(ModulePlot)
export(ModuleSignificance)
export(ModuleTraitHeatmap)
export(Normalize)
export(PickThreshold)
export(QC)
export(ReadExperimentalDesign)
export(ReadPhenotypeTable)
export(ReadProteinGroups)
export(Reshape)
export(SampleTree)
export(Show)
export(Subset)
export(Tidy)
export(as_data_frame)
export(assert_length_1)
export(get_geneinfo)
importFrom(AnnotationDbi,select)
importFrom(WGCNA,TOMsimilarity)
importFrom(WGCNA,adjacency)
importFrom(WGCNA,blueWhiteRed)
importFrom(WGCNA,cor)
importFrom(WGCNA,corPvalueStudent)
importFrom(WGCNA,enableWGCNAThreads)
importFrom(WGCNA,intramodularConnectivity)
importFrom(WGCNA,labeledHeatmap)
importFrom(WGCNA,labels2colors)
importFrom(WGCNA,mergeCloseModules)
importFrom(WGCNA,moduleEigengenes)
importFrom(WGCNA,pickSoftThreshold)
importFrom(WGCNA,plotDendroAndColors)
importFrom(WGCNA,standardColors)
importFrom(WGCNA,verboseScatterplot)
importFrom(data.table,":=")
importFrom(data.table,.SD)
importFrom(data.table,as.data.table)
importFrom(data.table,copy)
importFrom(data.table,data.table)
importFrom(data.table,fread)
importFrom(data.table,fwrite)
importFrom(data.table,setnames)
importFrom(dynamicTreeCut,cutreeDynamic)
importFrom(fastcluster,hclust)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,labs)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_classic)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,abline)
importFrom(graphics,par)
importFrom(magrittr,"%>%")
importFrom(magrittr,"%T>%")
importFrom(org.Hs.eg.db,org.Hs.eg.db)
importFrom(stats,as.dist)
importFrom(stats,dist)
importFrom(stats,median)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(utils,capture.output)
importFrom(utils,head)
importFrom(utils,str)