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Merge pull request #521 from GOMC-WSU/MP-Flags
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Allows GEMC simulations to control which boxes run MP moves
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jpotoff authored Nov 27, 2023
2 parents 198f222 + bbfcdb6 commit ff3f67a
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Showing 6 changed files with 92 additions and 5 deletions.
17 changes: 17 additions & 0 deletions src/ConfigSetup.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -82,6 +82,8 @@ ConfigSetup::ConfigSetup(void) {
sys.moves.rotate = DBL_MAX;
sys.moves.intraSwap = DBL_MAX;
sys.moves.multiParticleEnabled = false;
sys.moves.multiParticleLiquid = true;
sys.moves.multiParticleGas = false;
sys.moves.multiParticle = DBL_MAX;
sys.moves.multiParticleBrownian = DBL_MAX;
sys.moves.regrowth = DBL_MAX;
Expand Down Expand Up @@ -793,6 +795,14 @@ void ConfigSetup::Init(const char *fileName, MultiSim const *const &multisim) {
}
printf("%-40s %-4.4f \n", "Info: Multi-Particle move frequency",
sys.moves.multiParticle);
} else if (CheckString(line[0], "MultiParticleLiquid")) {
sys.moves.multiParticleLiquid = checkBool(line[1]);
printf("%-40s %-s \n", "Info: Multi-Particle liquid box move",
sys.moves.multiParticleLiquid ? "Active" : "Inactive");
} else if (CheckString(line[0], "MultiParticleGas")) {
sys.moves.multiParticleGas = checkBool(line[1]);
printf("%-40s %-s \n", "Info: Multi-Particle gas box move",
sys.moves.multiParticleGas ? "Active" : "Inactive");
} else if (CheckString(line[0], "MultiParticleBrownianFreq")) {
sys.moves.multiParticleBrownian = stringtod(line[1]);
if (sys.moves.multiParticleBrownian > 0.0) {
Expand Down Expand Up @@ -1961,6 +1971,13 @@ void ConfigSetup::verifyInputs(void) {
sys.moves.displace);
}
}

if (sys.moves.multiParticleEnabled && !sys.moves.multiParticleLiquid &&
!sys.moves.multiParticleGas) {
std::cout << "ERROR: Multi-Particle moves require either liquid or gas "
<< "box active!" << std::endl;
exit(EXIT_FAILURE);
}
#if ENSEMBLE == NPT
if (sys.moves.volume == DBL_MAX) {
if (!exptMode) {
Expand Down
7 changes: 4 additions & 3 deletions src/ConfigSetup.h
Original file line number Diff line number Diff line change
Expand Up @@ -5,8 +5,8 @@ A copy of the MIT License can be found in License.txt
along with this program, also can be found at
<https://opensource.org/licenses/MIT>.
********************************************************************************/
#ifndef CONFIGSETUP_H
#define CONFIGSETUP_H
#ifndef CONFIG_SETUP_H
#define CONFIG_SETUP_H

#include <iostream> //for cerr, cout;
#include <map> //for function handle storage.
Expand Down Expand Up @@ -173,6 +173,7 @@ struct MovePercents {
double displace, rotate, intraSwap, intraMemc, regrowth, crankShaft,
multiParticle, multiParticleBrownian, intraTargetedSwap;
bool multiParticleEnabled; // for both multiparticle and multiparticleBrownian
bool multiParticleLiquid, multiParticleGas; // GEMC: set boxes for MP moves
#ifdef VARIABLE_VOLUME
double volume;
#endif
Expand Down Expand Up @@ -918,4 +919,4 @@ class ConfigSetup {
InputFileReader reader;
};

#endif
#endif /*CONFIG_SETUP_H*/
2 changes: 2 additions & 0 deletions src/StaticVals.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -137,6 +137,8 @@ StaticVals::StaticVals(Setup &set)

{
multiParticleEnabled = set.config.sys.moves.multiParticleEnabled;
multiParticleLiquid = set.config.sys.moves.multiParticleLiquid;
multiParticleGas = set.config.sys.moves.multiParticleGas;
isOrthogonal = true;
if (set.config.in.restart.enable) {
IsBoxOrthogonal(set.pdb.cryst.cellAngle);
Expand Down
1 change: 1 addition & 0 deletions src/StaticVals.h
Original file line number Diff line number Diff line change
Expand Up @@ -39,6 +39,7 @@ class StaticVals {
#endif
bool isOrthogonal;
bool multiParticleEnabled;
bool multiParticleLiquid, multiParticleGas;

Forcefield forcefield;
SimEventFrequency simEventFreq;
Expand Down
35 changes: 34 additions & 1 deletion src/moves/MultiParticle.h
Original file line number Diff line number Diff line change
Expand Up @@ -52,6 +52,7 @@ class MultiParticle : public MoveBase {
COM newCOMs;
int moveType;
bool allTranslate;
bool multiParticleLiquid, multiParticleGas;
std::vector<uint> moleculeIndex;
std::vector<int> inForceRange;
const MoleculeLookup &molLookup;
Expand All @@ -63,6 +64,7 @@ class MultiParticle : public MoveBase {
const Molecules &mols;

double GetCoeff();
uint ChooseBox();
void CalculateTrialDistRot();
void RotateForceBiased(uint molIndex);
void TranslateForceBiased(uint molIndex);
Expand Down Expand Up @@ -108,7 +110,8 @@ inline MultiParticle::MultiParticle(System &sys, StaticVals const &statV)
// If we have only one atom in each kind, it means all molecules
// in the system are monoatomic
allTranslate = (numAtomsPerKind == molLookup.GetNumKind());

multiParticleLiquid = sys.statV.multiParticleLiquid;
multiParticleGas = sys.statV.multiParticleGas;
#ifdef GOMC_CUDA
cudaVars = sys.statV.forcefield.particles->getCUDAVars();

Expand Down Expand Up @@ -167,6 +170,11 @@ inline uint MultiParticle::Prep(const double subDraw, const double movPerc) {
uint state = mv::fail_state::NO_FAIL;
#if ENSEMBLE == GCMC
bPick = mv::BOX0;
#elif ENSEMBLE == GEMC
if (multiParticleLiquid != multiParticleGas) // Only pick one of the two boxes
bPick = ChooseBox();
else
prng.PickBox(bPick, subDraw, movPerc);
#else
prng.PickBox(bPick, subDraw, movPerc);
#endif
Expand Down Expand Up @@ -298,6 +306,31 @@ inline uint MultiParticle::PrepNEMTMC(const uint box, const uint midx,
return state;
}

inline uint MultiParticle::ChooseBox() {
double minDens = 1.0e20;
double maxDens = 0.0;
uint minB = 0, maxB = 0;
for (uint b = 0; b < BOX_TOTAL; ++b) {
double density = 0.0;
for (uint k = 0; k < molLookup.GetNumKind(); ++k) {
density += molLookup.NumKindInBox(k, b) * boxDimRef.volInv[b] *
molRef.kinds[k].molMass;
}
if (density > maxDens) {
maxDens = density;
maxB = b;
}
if (density < minDens) {
minDens = density;
minB = b;
}
}
if (multiParticleLiquid)
return maxB;
else
return minB;
}

inline uint MultiParticle::Transform() {
GOMC_EVENT_START(1, GomcProfileEvent::TRANS_MULTIPARTICLE);
// Based on the reference force decide whether to displace or rotate each
Expand Down
35 changes: 34 additions & 1 deletion src/moves/MultiParticleBrownianMotion.h
Original file line number Diff line number Diff line change
Expand Up @@ -58,12 +58,14 @@ class MultiParticleBrownian : public MoveBase {
const MoleculeLookup &molLookup;
Random123Wrapper &r123wrapper;
bool allTranslate;
bool multiParticleLiquid, multiParticleGas;
#ifdef GOMC_CUDA
VariablesCUDA *cudaVars;
bool isOrthogonal;
#endif

double GetCoeff();
uint ChooseBox();
void CalculateTrialDistRot();
void RotateForceBiased(uint molIndex);
void TranslateForceBiased(uint molIndex);
Expand Down Expand Up @@ -100,7 +102,8 @@ inline MultiParticleBrownian::MultiParticleBrownian(System &sys,
// If we have only one atom in each kind, it means all molecules
// in the system are monoatomic
allTranslate = (numAtomsPerKind == molLookup.GetNumKind());

multiParticleLiquid = sys.statV.multiParticleLiquid;
multiParticleGas = sys.statV.multiParticleGas;
#ifdef GOMC_CUDA
cudaVars = sys.statV.forcefield.particles->getCUDAVars();
isOrthogonal = statV.isOrthogonal;
Expand Down Expand Up @@ -153,6 +156,11 @@ inline uint MultiParticleBrownian::Prep(const double subDraw,
uint state = mv::fail_state::NO_FAIL;
#if ENSEMBLE == GCMC
bPick = mv::BOX0;
#elif ENSEMBLE == GEMC
if (multiParticleLiquid != multiParticleGas) // Only pick one of the two boxes
bPick = ChooseBox();
else
prng.PickBox(bPick, subDraw, movPerc);
#else
prng.PickBox(bPick, subDraw, movPerc);
#endif
Expand Down Expand Up @@ -273,6 +281,31 @@ inline uint MultiParticleBrownian::PrepNEMTMC(const uint box, const uint midx,
return state;
}

inline uint MultiParticleBrownian::ChooseBox() {
double minDens = 1.0e20;
double maxDens = 0.0;
uint minB = 0, maxB = 0;
for (uint b = 0; b < BOX_TOTAL; ++b) {
double density = 0.0;
for (uint k = 0; k < molLookup.GetNumKind(); ++k) {
density += molLookup.NumKindInBox(k, b) * boxDimRef.volInv[b] *
molRef.kinds[k].molMass;
}
if (density > maxDens) {
maxDens = density;
maxB = b;
}
if (density < minDens) {
minDens = density;
minB = b;
}
}
if (multiParticleLiquid)
return maxB;
else
return minB;
}

inline uint MultiParticleBrownian::Transform() {
GOMC_EVENT_START(1, GomcProfileEvent::TRANS_MULTIPARTICLE_BM);
// Based on the reference force decided whether to displace or rotate each
Expand Down

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